Gene detail

Detailed information of XP_020608241.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1902:79260...83705
NR annotation: XP_020608241.1, sorting nexin-17-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020752582.1

CTCCTGTCAAGTCTGTACATGTCAGAAACTTGCATGCTCTTTCTTTGAATAAACTAAAAAATCAACCTTGTAGCAACAGCAACATATGACCATGTAGAAAAACGACGGCGACATTTTCTTCGGCTGGTTAGGCGACATCATTACATAAAAGGATGTGACATGGCAACATGACTACCCCCCTTGGAAGGCCTCATAAGTAAGAGTTGTGACGTACAGTAATCCCTTCAAGTTTGTTCTCTGCTAGAGTGACAttaatgaaaatggaaaacaggaGGAACACTTGGAACTAGCCTTTGAATATCTCATAAGGAAAGACCAGATGGAATGGATAACAATCTACAGTGATCAGgCAATCCTGTTGAGCCTTTGCCTTCAGAGTATTGTCGATGAAATCCTCAGAATAAAAAACGGAAAACCAATTAAAAGGCCTAAAGATCGTGCAAAGATGAAGAAGGAAGCAAGTCCAGGTTTTGAGCGTACCAATTCTGTGACATCTGATGCATCGACAGAgGGTGACGTAGAACAAGAGAGCAAAACTGTGAATGGTTCAACTTCTCCATCCACAAGTCCAGAAGCTAGACAGAAACAGAGTTCACCGGGAAAACCAAAAACATCCAAACAATCGGCAGGTAAAGGACAATCACCCAAACCGGCAACTGCTCCGTCAAGTAATGCTGCCATGACAACAAACAAGGTGTTTGAAGGGATTGGAGACGACGACCTTTGAACTTTGAGCTTGTTGAAAGGTTACATGGTTAGAGTAATATGACTTCTAGCTTTTATATTTTATAAGTCAGGCTTTCattttatattgaaaaaattatgtattATATAATAATGGTAGATTTGTTGAGAGCCAATCAGGCAAAAGATAAAAGTGTTTAAAATTACCTGTGTGAAGCTATTGATTGCACTGAATGTTATAAATCACTGTATTTTCTTCGCACCGCTATAGCCATCTGAACAATTAAACCAAAGCCTATGTTCAAAGTCTGACGATTAGGGGAAACAAATATTGATCACAACATGTATGGCATTTGTTGAGGTGGTGAGAGGCGGTCTTTGCACGCAGTTTATGATTTTGGATCAAAATGGTGAAATAATTGTGCTAATTTTTACTATTCTTAATTTTCACGACAAATTTATGTACGTTAAGCGCAGATGCATTTGAGGTCAATTGCAGattctttcaaaatattattcTGGGAAATTTACCAAATTAtgtttattgttaaaaattGTGGCAAGAATTTGTTTAGGTCTGGAACAAATCAGttacaattattataataatatagaTTAAACTCAGGGGTTCGTTTTTTATGATGGTAGAATGTGACACCCTAAGAAACAGCTAGAAAAACAAGATTTATGTGGCTTTAAAACAGAAGTTTCTATTATTAGgctaaatatattttaattactcGTTTTCAGTCTTGTGGTGAACGTTTTGTACCcaattatattttacattttgtgtgaGGTTTTGAAGATAAATAGGGTTGATGTTATTAGTGACTGCAGGGCTCTATAAAAGGAAATTTCTGATTGTACCATTTCTCATCTCCAGCCGGCTGGACCGGTCAATTTGTAGAAATGGTTTTAGGTGAATAGATGCTAGCTTAGCCAGCTGTTTCAGTTAAGGTGGAAGCCAGAAAACGTTGGAGTTTTGGCAGCTTGAGCTCATGAAATGAAATGGCACTGAGTTTCTTTCGTTCTTGCAAAATGGGCACCCATCACTTCGTCTCACCAAAAACCTTGTTCTTTTTGACTTGTCAAACTCAGATAAATTTCTATTCTGTTGGCATTATACTTCAATGTTTGCAAGGGTCACTGACAGTGCAAGCTAttaaggagcttaagcaatgacgacggcgaccccgaggacaacgcctagtaaaaaatgaattctaTTTTACCTTTGATTTTCGCTATTGTCTAAATCTGTTTAGTGCGCCTATTGGTCTgaaaacttgctcaagctaaatatgtaacgctaGCGTTcgattccaaatgaaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18116	SNX17_FERM_C	Sorting Nexin 17 FERM C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR040842	Domain	Sorting nexin-17/31, FERM domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09282	HMGA1; high mobility group AT-hook protein 1	-	Chromosome and associated proteins	ko03036	deepkoala