Gene detail

Detailed information of XP_020608860.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1949:1445...3450
NR annotation: XP_020608860.1, interstitial collagenase-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O77656	Collagenase 3 OS=Bos taurus OX=9913 GN=MMP13 PE=2 SV=1
P45452	Collagenase 3 OS=Homo sapiens OX=9606 GN=MMP13 PE=1 SV=1
O18927	Collagenase 3 OS=Equus caballus OX=9796 GN=MMP13 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01471	PG_binding_1	Putative peptidoglycan binding domain	Domain	Interproscan
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002477	Domain	Peptidoglycan binding-like	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR021158	Binding_site	Peptidase M10A, cysteine switch, zinc binding site	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201	MATRIX METALLOPROTEINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0030574	Biological Process	collagen catabolic process	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan