Detailed information of XP_020608987.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1951:981370...987995
NR annotation: XP_020608987.1, probable RNA-dependent RNA polymerase 1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9LQV2RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1
Q0DXS3Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2
Q7XM31Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05183RdRPRNA dependent RNA polymeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR007855FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23079RNA-DEPENDENT RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003968Molecular FunctionRNA-dependent RNA polymerase activityInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031380Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11699RDR, RDRP; RNA-dependent RNA polymeraseEC:2.7.7.48
Chromosome and associated proteinsko03036deepkoala

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