Gene detail

Detailed information of XP_020609151.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_1956:273560...290438
NR annotation: XP_020609151.1, cholesterol 24-hydroxylase-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020753492.1

GGGAACCTTTTTTTTGCGAATCGTGGGAAAATGAAAACCgttaaaatcgcaaaaattagaacccgcaaaaaatttagtgccacacggtAGTGCATACCTGTGAAGCAACATGTGAAACTGACAAAAGATTTCCAAAAGTTTTTCACACCGTCTAAAACTCACAGCTGGCGTATTTCTTTTCAATGCACTTTTCACATGGTAAAATATTTCACGTGTCTCACATGACTTTTCACATAATTGGCACATGGTTTAACGCTCTGGTAGTGTAACGTAAGCACGTATTCTCTCAGATTCCtaactgaaatttttgttttctgggaGTGGCCGACTGGACCCGTTTTCTTGTTACACGCAAAATGGTTTACCTGATTTTGTACGTAGCAGGTGCCTTGGTTGTGCTATCGTTACTCGTGGTATGTGTTTTTGCGGTATACTTGCTTCATACAAGACGTAAATTTGCCCACATCCCAAGTCCACCGATGCCAAGTTTTTTTCTGGGCCATGTGAATGACATAGTTTCATATCGTCAGAGTGGACGGAACACTCAGTACAAATTTCTTCAATGGAGTATGGATTATGGCAAGGTGGTACTTGTTTGGTTAGCACATAAGCCGTTTGTTATAGTGTCTGATCCAGAGATTATAAAGGACATTCTCATTCTGAACGATCTTCCAAAACATCCTTTAATGTATGCAGATGCTAGCTACATCTATGgacaaagATTTCTTGGTGATGGAATTTCACTCACCGCGGACGTTAAGTCCTGGCAGAAAAGACGTGACGCTTTCGGACCAGCTTTCCATCGCAAGTGCCTTAAAGAATATATGAGTTCTTTCAATTCCACTGCCAATATTTTACTTGAACATCTTGGCACAATGGCTGacggaaaaacaaaagtttgtatGTATGATCAGTTATACCAAGCAGCATTAGATGTCATTTGTAAGGTTGGCTTTGGAATGGACATGGACATTATCAGTGGGAAGAACACTGAATTTACTGAGGCCATTTCACTGACTCTTGTTGGAATACACGTGGCAATCTTTGAACAACCATTTCACAAGTGGAATGTTTTTCAGTACCCTTTTCAGCGGCGTGTTATCAAGGCAGTCCAGTTCTTGCGTGAAACAGGAAGGAAAGTAAttgaagagagaaagaatgCAATGAACGAGGGAGAAGAGGTCCCTGATGATATATTACAACATATTATTGAGCAGCAAGGTTTGTAAGCTCCGGTCGTCAAATTCCGAAGTAGCGTCTCCCGAAGGTAGCCAACTCACCCTACTCCCCCGAAAACGTGAGATCCATGTTCAATAGTATATTTATATTTCTAATCAATAGTCAAGTGGAGGTTACTTACGGTAACTTGATATTGATAATTAAGGCACTCTTCAACAAGGGAAATTATCGCTTATGCCAAAAAGCGTcgtagaattttcatcaaataacaGAAACGCACTAAAATGGACTTTTCTTAAAGGTGAAATGGAAAACTCTGTATCATTTTCAACGGGAgtgtattaaaattaaaaacctttctttaaattaaaactaaaaactcGACCAGCGCTCTGAGATATGACAATTATTGAAACGGCAGGCTTACGTAGCAGTGCGTCATGAAGTAAAAACAATTTACTGTATCTGACTTGCTTTCATAccgaccactgacaacacggtcTAGACGTGAAGAGCCCACCCAGTTGTTGatctgaaaaacatttttttgttagacTGAGAGTATTGACCCCAAAGAAGTCGAGCTTGCATGGTGTGTAAACCATTCATATACACGAATATTTCTTTCAGACCCAGTCACGTGCCACTACCTAATTATGATGTCATATCGCGCCAAAATAACGTCACATGTATCAAAAAGTGACCGATCAGCTCTGATTTATGATACTATTGAAATGCGAGAAAATCCTCaaagtttatatgaaaaatcgaaaatctaTAATGATACGAAAACCTACAAATCGTGTAATTATCTCttgacaaaaaccaaaacacaatctcaccaaaatagaaaaacgtaTGCTTAGTACAAAAACAGGGTTGCACAGTGTTGTCGTTGCCCTTTGTTTTGATGCCCGGTTTCTCTTACTACGATAAATCTAGACATATATCTGTAcctt

Protein

Uniprot

Uniprot term	Description
Q9VLZ7	Probable cytochrome P450 4d21 OS=Drosophila melanogaster OX=7227 GN=Cyp4d21 PE=3 SV=1
W8JWW3	Cytochrome P450 72A225 OS=Catharanthus roseus OX=4058 GN=CYP72A225 PE=2 SV=1
P79401	Cytochrome P450 3A29 OS=Sus scrofa OX=9823 GN=CYP3A29 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128	Family	Cytochrome P450	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR039983	Family	Cholesterol 24-hydroxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24293	CYTOCHROME P450 FAMILY 46 SUBFAMILY A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0006707	Biological Process	cholesterol catabolic process	Interproscan
GO:0033781	Molecular Function	cholesterol 24-hydroxylase activity	Interproscan