Genomic Location: Sc7jCM8_1966:544016...549962
NR annotation: XP_020609199.1, syndetin-like isoform X1 [Orbicella faveolata]
| CDS | ||||
| LOC110047800 | ||||
| Transcript |
| rna-XM_020753541.1 |
| Protein |
| XP_020609200.1 |
| Uniprot term | Description |
|---|---|
| Q96JG6 | Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3 |
| Q8CI71 | Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2 |
| F1LSG8 | Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10475 | Vps54_N | Vacuolar-sorting protein 54, of GARP complex | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040047 | Family | Syndetin | Interproscan |
| IPR019515 | Domain | Vacuolar protein sorting-associated protein 54, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13258 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000149 | Molecular Function | SNARE binding | Interproscan |
| GO:0032456 | Biological Process | endocytic recycling | Interproscan |
| GO:0042147 | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| GO:1990745 | Cellular Component | EARP complex | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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