Gene detail

Detailed information of XP_020610374.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2103:41976...48930
NR annotation: XP_020610374.1, uncharacterized protein LOC110048956 isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020754715.1

GTAATTTTTCGTAGTCAATCATGCGTGGTTAGCGTGTGAATATTTGGACGTGAGTTATACGTTTATCGCACGAGAGCCATCTAAGAATGGCAGCGGGAACATTACTTGAAGATCTTGGTTGTTATAATTCCGATGTAGTCGACTTGTCCATCTCATCACAGGATTCTGTTATTCTGAACATCTGTAAAGATGGCATGGAGCTGGGAACTGTGCACTGCTTGGCTACTCAAGATCCTGGAGACTTATTTCAGTATGGACCAAGACAAGGAAATTTGGAGTTGCGTCAGTCATTAGCCAATTTTCTGGCTGAGGAGTATGGACATCAAGTATCAAGTGAGCGTCTGTTCATTACTGGAGGATCATCACAAGGCCTTGTTTTGTTATGCAATGTGCTCTCTCAGTCTGGGGATCCTGTTTTTGTGCCTGATCTCACTGGTAGTTCCCTTGACATTTTCAGGGATTTGAGCCTCAAACTTGTTTCAGtTCCAACTGATGAGAATGGGTTGATTGTGGAAGAACTGGACAAACTTCTGAAAGCACATTCTTATAGGAAGAGATCAGCAACAGAAAAGAAGCCATTCTGGGGATTTGTTTACTTGATGACTATTTTCAAGAATCCTACTGGACAGTCACTCCCAGAAGaCAGATGTAATGCTCTTATTGAGATTATCAGGAAGCATAAGGTGTTGTGTTTGTGTGACGACACTTTGGCCTGTTTGTCCTATGCTGAAAGTGACCCTGCATTTAAAAAAGCACCAAAAAGGCTCTTTGCCTATGATCAAAGTTCAGCAGGTTCTGCAGAACATGGAAACATTGTTTCTCTTGGATCATTTTCTACAATATTCAGTCCTGGTTTGAGAATTGGCTGGTTGGAAGCCCCGCAAAATGTCTTAGGACATTTAAAAAATAGttcttttgtgTGCCACGTTGGTTCAAGTCAGCACTATCTCAGTGGAGTGATGGCTAGTGTCATTGAACTTGGTCAACTTGAAAAACTTCTTTCCTCTCTGAAAATCAGCTACCATGGTCGACTTGCTGCCATGTTTGATGTACTCCTGCAACACATGCCCAAAGAAGTAAAGCTTTCCAAACCTCAGGGTGGAATATTTGTATGGATAACGTTACCTCAAAACATTGATGCCGATGAGCTGCTGAAAGTTTGTAGAGAAAAGTACAATGTTGGCTTCTCTCCTGGCTCAGAATTCTCTTCGACCCCGGACAAGTTCAGAAACTGTATTCGGTTGTGTGTTGCTCATTACAACGAAAAAATTCTGTCTTCAGCTGTGGAGAGACTGGCGACAGCTATCAAGGAGAAAATGTAGGCAGCTTCTTGTGGGCAACCTAGAAAGATGACGCTGCAGACTGTGGTGGAAAATAGTGCGACCTGCAGAAAACAGAAACATATTATGAAGCTGGAGAGTTATGGTGCAAATTTGGGGTTACTTCTTCCGTGTCTACGAAGCAGCTGAGATCTGTATAGAAGCAAGAAACTGAACCGAGAAACGGTTGaaccacaaaaagaaaattaggaGAAGGACAAGATAGTGGGTTCTAATCACTTAGATACGTTTTAAATTGGATGAAGAGGTCTTGTTTGGACACTATTCTTGTATCGAATTGTCTTGCAAGATTTGCAGGGGCGATAGTTCCTGTGAACGGTCTGGGCGTACAGTACTTAATTAAGATGATTATGACTTATCATACCAGCTAATGGTAATCTTTTTTTGCACTGAGGTAGGTTAACTTGCAAGGCAGGGAGCTGCCTTATTCGGTGACTTTTGATTTCCTGCCCCGTGACGTGGCACAAATGAGCAGTCTTAGTTTGGTCCAAGTTTCCCAGCGCGCCGAAACTGAGAAATGATACAGACATATAAAGTGATCTCTTCTCTCAATTGCATTCACTGCTACAGGGAGCTGTTTTCGCAATGTGTTACGAGTGTCGttgtagagcagggttgtttccagacaactcaggatcgctggtaacagcaacaaactaatttatttccgtaaggtAAC

Protein

Uniprot

Uniprot term	Description
H3ZPL1	Aromatic-amino-acid aminotransferase 1 OS=Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) OX=523849 GN=OCC_04335 PE=1 SV=1
Q72LL6	2-aminoadipate transaminase OS=Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) OX=262724 GN=lysN PE=1 SV=1
P77730	Uncharacterized HTH-type transcriptional regulator YdcR OS=Escherichia coli (strain K12) OX=83333 GN=ydcR PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42858	AMINOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0047536	Molecular Function	2-aminoadipate transaminase activity	Interproscan