Gene detail

Detailed information of XP_020611476.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2178:1329980...1343555
NR annotation: XP_020611476.1, uncharacterized protein LOC110049961 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020755817.1

TCGATGGGATATTGTTGGCAAAGGAGGCGCTTTGTTGTatcaaaaattgctttaaagTAAACACAAACCAAAAGTCTCTTGTTGACTATTAAACATGCTTAACTAAGTGCATGTGGTATCTCGGCTACTGTATCAAGATAGAACTCTCCGCTCTCAAACCACGAGTACAGTTTGAGTGAGCGGCCGTTGAAGAACGCCGCTCCGAAGGACAAATCTGAGtcatcAGAATCAcagcaaattgaaaattaccaCGATGGACTGCATGAAAAAAGCAGTGGTGTTCGTATTGGCGTGCATGACCTTTCTGGAAACTCAAGCCGATGAAGACATTCTAACTAATTCTGAAAATGGATTTCGTTACAAATATCTCGGCTGTTATAAAGACAAAGTTCCTTCTCGAGCGCTGCCAGTACAGTTGGAAAGCGCCAAAAACTTCATCAGATGGAAAATTGACggctataactttaaaaaagtaatCGACGTGTGCGCGGACCGCGCGCGTGCCCGCGGGCTGTCTCTGTTTGGTGTGCAGTTTTGGGGGGAATGCTGGGGAGGAGAACAAGATGCGCGTTACTATAGATACGGCAGGGAATCGCGACCCAAAAGGTGCTTCACAGGAATAGGAGGGTCTTGGACTAACGCTGTTTATAAACTCATTTcagAGTGCAACGTCAAGGATGTCACGTACAAAGATGGAGATTCTTTCTACATACCTCAGAACCCAATTCATTATAATGACATTGGCTGCAAAGCATGTTCATGTGATCGAGGCGTCACAACCTGCCCAAATGAGGCAAAATGTGACGTCTTCTCTAAAGTTCCCTGCGAGAAGCTCATCCCTGCTCCCCAGGGAAAATGCTGTCCAACATGCGCTTGTTATCACAAAAACACTTATTATAAAGACGGTCAGACTTGGGTCAACAGACAACCAAACGATTGTTTTCAGTGCACATGTGTCGCGAAGGAAACAAAGTGTGAGGTGGTAAAGTGCCCTGGGAACTGCCCCAATCCTGTTTACGAGCCTGGAAAATGTTGTCCAACGTGTAGACCCGGTGCACCTGTCACTGAAGCCTCGTTCACGCTACCTGAAACTACTACCAGACTCCCTCCAGTATTTCCGCCTTTCCCAGGTTTCCCTGGTAACCACAAACGAAGTCTGAAGATGAAGAAAAGGAACAAATGGACCACCTACTGTTTTGAACAGGATTCTAACATGGTGCGAGAACGGGAATTTGAATTGGCCGATGAAGACATTCTAACTAATTCTGAAAATGGATTTCGTTACAAATATCTCGGCTGTTATAAAGACAAAGTTCCTTCTCGAGCGCTGCCAGTACAGTTGGAAAGCGCCAAAAACTTCATCAGATGGAAAATTGACggctataactttaaaaaagtaatCGACGTGTGCGCGGACCGCGCGCGTGCCCGCGGGCTGTCTCTGTTTGGTGTGCAGTTTTGGGGGGAATGCTGGGGAGGAGAACAAGATGCGCGTTACTATAGATACGGCAGGGAATCGCGACCCAAAAGGTGCTTCACAGGAATAGGAGGGTCTTGGACTAACGCTGTTTATAAACTCATTTcagAGTGCAACGTCAAGGATGTCACGTACAAAGATGGAGATTCTTTCTACATACCTCAGAACCCAATTCATTATAATGACATTGGCTGCAAAGCATGTTCATGTGATCGAGGCGTCACAACCTGCCCAAATGAGGCAAAATGTGACGTCTTCTCTAAAGTTCCCTGCGAGAAGCTCATCCCTGCTCCCCAGGGAAAATGCTGTCCAACATGCGCTTGTTATCACAAAAACACTTATTATAAAGACGGTCAGACTTGGGTCAACAGACAACCAAACGATTGTTTTCAGTGCACATGTGTCGCGAAGGAAACAAAGTGTGAGGTGGTAAAGTGCCCTGGGAACTGCCCCAATCCTGTTTACGAGCCTGGAAAATGTTGTCCAACGTGTAGACCCGGTGCACCTGTCACTGAAGCCTCGTTCACGCTACCTGAAACTACTACCAGACTCCCTCCAGTATTTCCGCCTTTCCCAGGTTTCCCTGGTAACCACAAACGAAGTCTGAAGATGAAGAAAAGGAACAAATGGAGTTACAACTAATAACGCTAAGttgcAGGAACTGCGTGCGCCTATGCTAAGTGAGGAGGAACTGGGTTCAATGAAACGGAAAATATATACCATTAAGTACTTTACGCGTCGatgtttgaagaaaacagtAATATTCCAGGGAGCAGTCTCGTTTTACTGcccaaaagttaaaaaaattaaatcattaaaatttgaaacaatttgtttGTTGTGTGTGAATGAGACATTTCTTAGTGGACGCCTTATAACCCCCAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00093	VWC	von Willebrand factor type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007	Domain	VWFC domain	Interproscan
IPR052624	Family	Cysteine-rich motor neuron 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46439	CYSTEINE-RICH MOTOR NEURON 1 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan