Detailed information of XP_020611654.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2203:169455...177001
NR annotation: XP_020611654.1, double-stranded RNA-binding protein Staufen homolog 2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZW47Double-stranded RNA-binding protein Staufen homolog 2 OS=Danio rerio OX=7955 GN=stau2 PE=2 SV=2
Q5M7M7Double-stranded RNA-binding protein Staufen homolog 2 OS=Xenopus tropicalis OX=8364 GN=stau2 PE=2 SV=1
Q3L1C9Double-stranded RNA-binding protein Staufen homolog OS=Aplysia californica OX=6500 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF16482Staufen_CStaufen C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051740FamilyDouble-stranded RNA-binding domain-containing proteinInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR032478DomainStaufen, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46054MATERNAL EFFECT PROTEIN STAUFENInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007281Biological Processgerm cell developmentInterproscan
GO:0008298Biological Processintracellular mRNA localizationInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0035418Biological Processprotein localization to synapseInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0098964Biological Processanterograde dendritic transport of messenger ribonucleoprotein complexInterproscan
GO:1990124Cellular Componentobsolete messenger ribonucleoprotein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17597STAU; double-stranded RNA-binding protein Staufen-Messenger RNA biogenesisko03019deepkoala

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