Gene detail

Detailed information of XP_020612108.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2224:531141...534564
NR annotation: XP_020612108.1, proton-coupled folate transporter-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020756449.1

GATCCCAGCATTATTAAGTTCGCTAGTAGGCATTTatacagctgggtggagagaggcactgtgagagaaaagtttCTTCCTCAAGAACGCAGCACAAGGGTTCAAATCCAGACTGCTCATTCCAGtgtcaagtgcactaaccatgaggtcactgcaTCTCCACACATGCATGCTGATTAAACAATGTTTATTAAtcaactgtattttttttttccttgcagcCAGTGGGATGGCTGGTCTCAGCGGTTATTACCCAACCGTGATTCTAGCAATACTTGCTTATGTTGCAGACACAACTAAACCAGACTCTAGAGCATTGAGGCTTGGCATTCTAGAAGCTATAGCCTTTGTTTGTGGGACAGGTGTATATTTTGGCAGTGGTGTGTGGATCAAGAACTATGGCTATGAATCAGTCTATTTGGTAATATTGACATTACATCTCCTGAATCTTGTCTACGTGGTCATCTTTCTCCCTGAATCGTTACCACAAGAGCTCAAACAGAACACAACAGGCCTATCCTGTGATGCTGTCAAATCTATTTGGACTGTTTACACGAAGAAGCGACTTGGACGCTGGGTCCTTCTAGCTCTCCTGATTTGTTCAGTTCTTGTTTACTTAGCAGGATTTGTTGTACAAACATTATTGGTTCTATTTGGTAAAAGAGCTCCACTTTGCTGGGAATCATCTGTTATTGGTTACTTTCTTGGGGCATCACTGTTTTCCAAAGCTGTTGGTGCTGTGGTAGGAATAAAACTTTGTTCATGCTTAGGAATCTCTAATTTTGGTGCTATTCAAATGGGAGTGTTCTTCCTCATAGCAAACCTGGTAATGATTGGATTTTCCAGGACCACACTGGAAATGTTCTTGGCGACAGCTCTTGGTTTCTTCAGTGGTGTGCCACAGCCCTGCATCAGAGCAGAAATGTCCATATTGGTCGACAAAGAAGAACAAGGTGCTCTTTTTGCCATCCTAGCATCTGCTGAAAGTTTGTGCAACTTTTGCAGTCAATTGATTTTCAATCCACTGTACACTTGGACTATAAATGAACTCAAGGGAAAATTTGCTGCTGGTATAACCTTTTTCATCAATGCTGGGATTTTGCTAATTCCTATGGTTCTTATTGGGATTATTCAGAGGTTTAAACCTTCAAAACCTAAGGAATGTCCAACTCTTATTGACAACGAAGACCCAGTTTCATAAAGATGACATTAGCAAATGATGTCCTTGTATATATGCACTCGCACTTCGGAGCAGTTTATACCAATTGTACATATTGCAATTTGTCGGTCTCAAAATTCATTCTAGgcatgagaagaaaaattattttaatttaaggcTCGTGAAGTACATACATGCGTAAACGTTATCCTTAGacaaaccaaaatttgaaaagtaaatgaattcattttaataatgttacattttgaaattctcaaatccaTTCGCAAAGTACGTGacaccatagttagtagaggggactaACTATGGTGACACATTGTGTTAGTTACGGTGTCAAGCACAGCAAGTGTGAAACAAATGGTCAATAAGTTTGTTCCCTTTCGTTAcatatttgtaatttgaaaaCTTGCACTGCTTTATTTCCAAAATCCAGAAATCTATGTACTTCTATGAAACTGGCATGCAAAGATCTTGGTGCAGATCAAACAGTTTATCTACTCGAGGGAGGTTTCGGTTTCCACAATAAACCAGTTCCCACACTAactataaatttttcttgatttttttgtggTACTGTACTTTAGGCGCCATTTCCAGCTGTTTTGTGAGACTGCGTTCTTTGTTATGCTATTTAGCTTACTTGCTTGGTGAGTGATTTCTAAATGCAAATGTCAAACGATGACAGCAAAGATCAACCAAAAGAATCGTAATTTAGGGTCATCGTCATGGACACTGTTATCTGCACATTATTGTACTGCCATAGGGCCTTTTCGAAATTACCAcccaacaaataaaaaaaatcacaatgttTAA

Protein

Uniprot

Uniprot term	Description
Q6PEM8	Proton-coupled folate transporter OS=Mus musculus OX=10090 GN=Slc46a1 PE=1 SV=1
Q5EBA8	Proton-coupled folate transporter OS=Rattus norvegicus OX=10116 GN=Slc46a1 PE=1 SV=1
Q96NT5	Proton-coupled folate transporter OS=Homo sapiens OX=9606 GN=SLC46A1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23507	ZGC:174356	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08231	SLC16A2; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 2	-	Transporters	ko02000	deepkoala