Gene detail

Detailed information of XP_020612646.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2248:390108...400243
NR annotation: XP_020612646.1, uncharacterized protein LOC110051013 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020756987.1

TTCCACCCGCCAAGAAGGTGTACAAAAGAGTTTGCGTGACTTATTGCGTGACAGTATCGTCTCTAAGGCAAAAATGGCCACCAGTGTGCTGTCTAGGGTTTTGAGGCCTCTCTCTCGCACAGCAATCCGTCCCATTCGCAGCTTCCATAGACCTTGGCCTGTTTCAGTTTTAACGAGGCAGAAGAGTTCTTCAACTGAGCCAAGTTCGGTTGAAAACGCGAAAGAAGCGAACTGGAAATGCAGACAAGATTTGGCGACGGCACTTCGAGGTCTCGACTGGTACGGCTTGAGTGAAGGTGTTTGCACGCACTTGACGATGATGGCTCCTGCATTGAGCGGCGATGGAGAGGTCATGCTCATGATTCCTCATGGTCTCCATTGGAGTCAGGCAACCCCATCATCTCTGCTAGGTGTCAGTGACAGAGGTGAGCTGGTGGAAGGCAAAGGTCACATACAGATAGAGGCTAATGCAATCCACAAAGGTGTTCATGATGCTAGGCCAGATGCGGTGTGTGTCTTCCATCTTCACTCGCCATACACAACTGCTATAGGAATGCTGGAAGAAGAGGTGTTTGGCATGTACCACCAGACACACTGTCGTTTCTACAATGATTTTGCTTATGACCCAAAATATGGAGGAGCTGCTTTGAGTTGCGAAGAAGGCGAGCGACTGGCTAAGCTTATTGGAAAAAAGGCAGTCCTGTTTATGGGAAATCATGGCGTGTTATTTACTGCACCAACTGCAGCTATCGCATTTGACAATGCCTACTTTATGGAACGCGCTTGTATGATGCAGatgaTTGCAATGCAAACTGGGAAGAAACTCCGCGAGTTGCCCGATGACATCAGCAAGTTGACTTACCAACAAACCCAAGACGCATTAGAATATTATGCAAATGCTCATTTTGAGGGAATTAAGGCTGTACTTCTGCAGAAAGACCCAGGATTTTTAAATCAATGATGCTTAATAATCTTGTTTTCCAGTCGGTGGTCAGTACTTTCACTGacccctgaaaaaaaattatcagtgACCCCATAGACCCTAttcaaaaatggctgccaatttacaATTCTTTTGTATTCGTTTAAATTAACCCAACTGAcctcttttgaattatcaactcaaaaacgaggttagttgggatAACTGTAATACTTACAcgagaatttttaattggcagccatttatgaatggGACCAAAAGACGGGGCTCTTGGTAATCTTTTAGTATATATACAGTGTTTGTATACGGTCAGAATAGTGTAGTTTCTATATTATATGTCGACACTGAATGGGTAATAGCAAACCACGTATTTCTGTttgaattgaacgctgtcattacatttTTAACCTGAGCACGTTGTAAGAGCGATAGGTGTACTGGGCAGATCTAAAGAATTGCGTAATTCGTAgatgaaatataaattcagtttttactaggcgtcatcattgcttaagctttctaatattaataaagttattaccAGGACTGCAAAAACAGCTAGACTCCTCCAAaacagatgatgatgacgacgatgacaaAGAAAAGACGACGACGATGGCGGCGGTCGCGGCGGCGATCGAAGTAGCAGTGCTTCATGTTTGTGGTGGTGATGACAATTAGGAAGTTTGagcaaaccacaacggcgaCGGCAACTAGGACGAACATAACAGTGGCTGTGCATGTGTGTTTTAAATCTTGGTCTATTTCTTTGTTGctttctgcaaaacaacgacgtgaaatgaccaaattctgtgcAGGCTAGAGAATGTGAACCACAACGGccaatatttataattttaaatgtCTAATTCAACGAGATGAATTAGACAATTTGAGATGTCTCCGACAGCCATAGACTAACTAAATGACTTCAGAGtttcgcgagattcgtaggttgaatataaattcattttccaATCGATGTTGTCCCCGCGTCGCCGTTGTGGTTGCTTAAAACTTCCTAATGATGGGAGTTGCTCCGGGTCTAATTAGCTCCACTGACTGTTCTTATCACTGTTTACGCGTGTGAAAACCCCTGCGCATGTAGGTTAAGACTAAAGAAAAAACTGTGCCCCTGATTCACGCgtaaaactagaaaaaaagaaaagaaaaagaagaagaaaaacatatcGCACTAATTTTGGTAATATGTACGACTTTGCACAACATGTACATCTAGTCCATTTGcaataaaagaatattttgaaaggG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00596	Aldolase_II	Class II Aldolase and Adducin N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036409	Homologous_superfamily	Class II aldolase/adducin N-terminal domain superfamily	Interproscan
IPR001303	Domain	Class II aldolase/adducin N-terminal	Interproscan
IPR051017	Family	Aldolase class II Adducin subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10672	ADDUCIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005856	Cellular Component	cytoskeleton	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01628	fucA; L-fuculose-phosphate aldolase	EC:4.1.2.17	Fructose and mannose metabolism	ko00051	deepkoala