Detailed information of XP_020612877.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2259:1292489...1295963
NR annotation: XP_020612877.1, homeobox protein ceh-13-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10181Homeobox protein rough OS=Drosophila melanogaster OX=7227 GN=ro PE=2 SV=4
P18264Homeobox protein rough OS=Drosophila virilis OX=7244 GN=ro PE=3 SV=2
Q06615Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050877FamilyEMX/VAX/Noto Homeobox Transcription FactorsInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24339HOMEOBOX PROTEIN EMX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007417Biological Processcentral nervous system developmentInterproscan
GO:0007420Biological Processbrain developmentInterproscan
GO:0030182Biological Processneuron differentiationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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