Gene detail

Detailed information of XP_020613339.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2297:396401...405071
NR annotation: XP_020613338.1, allene oxide synthase-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020757680.1

CTTTGGTAAGTTACGCAAAGTCGCAGGCAATCAAATAATGTCTCCATAGTCAATCGTGACAAATTCAAACAGGAGTCAGTTTAACTGTCAATACAGCACCTCGAAACCTGAGGCAGGTACTAGCTGGTATCATGCAAGTCTCCCCCGTCAACGAAGAGAAAGAAGTTCCCGGCGAGGACAGATGGAAGTTTTTTCACATTGTTGAGCTTGTTATGAAAGGCCAAGGCTACTTCtacaaaagaagagaaaagtatAAATGCACTGTATTTAAAGTCAACATGGGTGTCAAGGGTATCCATGTTTGCGATAAAAAAGGGATCAGGGTCCTTTTTAACATGGAAAAGATTTATAAGGAGGCGGCCTTTGGAAGACTGAACTATAACATTTGTCTGCTGGATGGTTACACACCTTCAATGTTCTCAAATGGAGTTCCTCACgaaaatcaaaaaacatttcTGATGCAAATCTGCAAAATAGCTCAGCAAAGTACAATATTTGAAACGAGTGTAAAACTGATCAAAGAATATTCCAcgatatggcaaaacgcagATTCTCAATTGCAATCCAACTGGGAAGAAAGCGTCATGAATCTCACAAGTGACATTTTCACAGAATCTTTCTTCGGAGTCAGAGTGGATTCAAACGCAATGTACACATGCCTTAAGGGGAGTTGGGCAAAAGGAAGtaaattaaaaaaagcaatGGGGGGTGCAAGTTGCTTAAAGAAGGCCTTCCGAGAGAGCCCAGGTATCGCCGACATTGTCAAAATCGCAGCCAATTCAGGAGTCACAGAGGACCAAGCGTTAATGGACGTTTTATTTATGCTCAATTTCAATTCGTACGGCGGTGTTTCTGGCGCTCTAAGGTCCTGTCTGGCTCGTCTATTTATACTAGAACAggaatataaacagaaaatgagaaatgaaataattacaGTGTTATCAAACCAGGAACTCTCCATAGAGGCGTTTAAGGAAATGCCTCATCTACACAACTTCGTCCTGGAGATACTGCGCATGCACCCGCCAGTGCCGGTTTTCTTTGGGAGAGCCAAAGACAACTTTATTCTGCAATCAGAGTGTGGCAACTTCATCGTAAAGAAGGACGAACTTCTTGTGGGAAACGTACACATGGCTCACAGAGACGAAAGCATATTCGATCAACCGAATACATTCATGCCGTCTCGTTTTGAAAACGAGgctttattaGAACATATCATGTTTGGATATGGACCATTTAATGAAGAGCCCACGCCCAAAAATCATCACTGTCCAGGACAGGACATCACCCTGACTGTGCTCAAGGTTGTAGTGTCACACATTTTGCTATATTGCGAGTTTGCTTTGGTAGCACGCCCCGAGTGGACCGGCAAAAAATTAAGAAGAGTTGGTTGTCCGGACAAGCCAATGAAATTGTCGTATTTCAAATACACGCCAACTGAGGCTCAAGTTGGCGAAGCACAACTTCAAGTGACGAGCATAGAAAACGACTAGGATCCGCTGTCGTGAACCTGGGGTCAATGTACAACCTACATACGATCAGCCATAAGGAAGTTTCCATAGAAAAGGAACCTACGGTGGCACTCACCTAAATACATGAACTGAGGCGAAATAGTAGCAAATCCAAGAGACACTACGATGCTCTCTATTGAGAGGTCACAACCGATAAGCAGGATGTCATGGCAAGGGCATTATGTTTGGCTGCACCAAAGGCACCACATGCATACACGCACCAGTGGATATTACATACTACATATAGAAGTCTGAAGCCTTACACACTTTAAATTACATcgaatttaaaatgaacacgCACCGGTGGATAAGTTCCTAGATGAGAATTACTTATGCGCGTGCAATATTGGATAATTTATGTCACGTTTATTTAAAGTTACCACATGACCAACTTTTGTTGGTAAAACTTTCGTGATGAGTTGTGTTTAATGAGAAAAGTCTCTGGAGAGGAACGACAGGAATTTTAGTAGCCATATACTTTACAAGCTAAACGTCTCTTTTATATGCAACAAACTGGTAGCGTATCAGTTGATAGATGCCGGCTAGCAATATTTCGCTAGCTAACGAAACTTAACTTGGTAAATCACTGATCAAATTCTCATATCAAACAGTTAAGGAAATGTATGCCTAATCACATGGAGAATACAGTTATGCTTGAAACTACCCACATCACCCAAGCCCTTCCCGTCCTGTTCCGTTTACACAACGGGATCAGATACAAACATAAATTTATGGTTAGCAAGTTAATTTACTTTAAGTTTATAATATATGTACGtaacaaaaaatacacaattATCACAATAAAGTACTTTAGAAATTTTA

Protein

Uniprot

Uniprot term	Description
Q40778	Allene oxide synthase CYP74A2 OS=Parthenium argentatum OX=35935 GN=CYP74A2 PE=1 SV=2
B3LF83	Probable inactive linolenate hydroperoxide lyase OS=Arabidopsis thaliana OX=3702 GN=CYP74B2 PE=2 SV=1
K4CF70	Fatty acid hydroperoxide lyase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HPL PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan
IPR002403	Family	Cytochrome P450, E-class, group IV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24286	CYTOCHROME P450 26	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0016125	Biological Process	sterol metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan