Detailed information of XP_020613519.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_23:2779394...2785862
NR annotation: XP_020613519.1, pre-rRNA processing protein FTSJ3-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZKM1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Gallus gallus OX=9031 GN=FTSJ3 PE=2 SV=2
Q5RAS1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Pongo abelii OX=9601 GN=FTSJ3 PE=2 SV=1
Q9DBE9pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Mus musculus OX=10090 GN=Ftsj3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11861DUF3381Ribosomal RNA methyltransferase Spb1, DUF3381DomainInterproscan
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024576DomainRibosomal RNA methyltransferase Spb1, domain of unknown function DUF3381Interproscan
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR015507FamilyRibosomal RNA large subunit methyltransferase EInterproscan
IPR050082FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10920RIBOSOMAL RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008650Molecular FunctionrRNA (uridine-2'-O-)-methyltransferase activityInterproscan
GO:0016435Molecular FunctionrRNA (guanine) methyltransferase activityInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan

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