Genomic Location: Sc7jCM8_2332:1935441...1941069
NR annotation: XP_020614100.1, collagen alpha chain-like isoform X5 [Orbicella faveolata]
| CDS |
| LOC110052323 |
| Transcript |
| rna-XM_020758441.1 |
| Protein |
| XP_020614100.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF01410 | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16146 | INTELECTIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
