Genomic Location: Sc7jCM8_2332:1615015...1643234
NR annotation: XP_020614255.1, uncharacterized protein LOC110052467 [Orbicella faveolata]
| CDS | ||||
| LOC110052467 | ||||
| Transcript |
| rna-XM_020758596.1 |
| Protein |
| XP_020614255.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| B9FHF3 | DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica OX=39947 GN=ERDJ3B PE=1 SV=1 | |||
| Q9LZK5 | DnaJ protein ERDJ3B OS=Arabidopsis thaliana OX=3702 GN=ERDJ3B PE=1 SV=1 | |||
| Q8IZP2 | Putative protein FAM10A4 OS=Homo sapiens OX=9606 GN=ST13P4 PE=5 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Alpha-Helix|UBA |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13432 | TPR_16 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00226 | DnaJ | DnaJ domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009060 | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR001623 | Domain | DnaJ domain | Interproscan |
| IPR036869 | Homologous_superfamily | Chaperone J-domain superfamily | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47678 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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