Gene detail

Detailed information of XP_020615187.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2393:856294...863510
NR annotation: XP_020615187.1, alpha-(1,3)-fucosyltransferase 5-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020759528.1

acgacggcgacaacgacaacgacaacgacaacgacaacgacgacgacaatgacaatgattATGATGCTATTGCCGGAGAGCCTGGTGAAAACCAAGTCATGCTATAAGCAATTGGTTTTGTTAAAAGTTGATTTACTCTTCAGGAAATCCTGTTATCAAGCACATTCATCGATCACTGGCAACAGTTTAGTCCTTACCTTTTCTTTTACAGTTCCCATCAGGCTTGGAAAGGAGAACCCCAGGTTAAAAATGAATGCGGCGAAAAGGATGCTAAGGCCCTATTATTGCTTCTTTGTCCTAACCAAGAAACAGAGAAGAAACCTGCGGATTGGCTTTGCCACAACCTTAATGGTAGTGGCATGTTATCGAATAATCAGTTTTATTCAGTATAAAGAATCCCATGGTGTTGGCGTCATTAGTCCTAATACGTTTCAGTCAGTAAACCAAACGAAGTTGATATTGGTGTACGCTCCGTGGCCTTTCGAGCCATGGGGTCCGAAAAATGCTGAAGAGGCACAAGGTTACAAATTCACAGATTGGGACGGTACTCCATGCGAAGAAGACAGATGTCAAATCACTTTTGATAAAAGTTTACGCAACTTTAGTGATGCCGTGCTTGTACACAACGGAGGAACATACAACCCGAAATTCAATATCGAAGAAGCCAAGAGAAACCGGCCATATGCACAGAGATGGGTCTTCTACTCAAAGGAAAGTCCTAGTGTGGCGGCCGTGGGAGCCCGCGCTGACGGCGTGTATAACTGGACTGCAACATATCGGCGAGATTCGGACTTTTTCGTCCCGTATGGAGCTTACGTTCCCTTAGAACTCCAAACTAAACCAGCTGGCGAGGATATTACAGGTGAACAGGTTCCGTTAAATAAGAGGACGAAAACAGCCGAAGAGTCTGCGGAACAAGCCGAAGAAAATGTAAACTACGCAAAGGGAAAAGATAAAATGGCCACTTTCGGTGTCAGCAATCACTGTAACCAAAATGGAGTTAGATTCTCATTTGTCCGCGCACTCATGAAACACATAGATATAAGCCTCTATGGAAAATGTGCAGCTATGTTTGAATCGAATAACACCTGGCAGTGTCCGCGCCGCAATCAACAGATCAGTAGTGATTGTGCTGAAGAGCTTCAACGCCACAAGTTCTACCTCGCCTTCGAAAATAGTTTGTGTGTAGATTACATAACGGAGAAGTATTGGAGAAATTCACTTGAGCGAGGATTGGTCCCAGTGGTTCTTGGTGGCGCTCAGTACGGTCCCGAACTGGTAATTCCTGGTTCTTTCATCAACGCAGCCAACTTCAATTCCGTTAACGATCTTGCAGATTACCTGAAGTATCTGGATAAGAACGATACGGCTTATAACCAGTATTTTAAATGGAAAACCAAATACAAGGTTGTCAAGCACAATTTTTGGTTATGCCAATTGTGCAAGGCCCTTCACGATCCAACGAAACCGGCGaaaatttatcacaaaatatCCGAGTTTATGGGGATTAAAGGATCATGTAAAATTGACGAAGAGCGTATCAGAGGAATTATTAGCAGGGGATTGGTCCCCGTTGTCCTTGGAGGCGCACAGTACAGTCCCGAGCTGGTAATTCCTGGTTCTTTCATCAACGCAGCCGACTTTGATTCCGTTAAAGATCTCGCAGATTATCTGAAGTATCTGGATAAGAATGACACGGCCTATAACCAGTATTTTAAATGGAAAACCAAATACAAGGTTGTCCAGTACGAATTCTGGTTATGCCAACTGTGTAAAGCCCTTCATGATCCAACGAAACCGCCCaaaatttatcacaaaatgtCTGAGTATTGGGGAAGATATGGCGGATCGTGCCAACTTAACGAAGATCGAGTTTGGAACATTATCAATAAAGGCTGAAAGACGGCACATGAACTTGGAGCCGTTGTTACTTGGAGCCAGAATATGGAATCACAGGGCGAACTCACGGAGGGACTCACGGACGGATCGACGAATAAACAGACGCAGtaaattcaaataaacattcGGGATTTTCTAATACTATATTAGAGAAGAATTTGGGTTTTTATATATTGAGCATATATCGCAGTCTTGCATACTTAGGCGGTGTTCACTCCCTGATTTAGTACACGGAAGTTGTATCTTCTCGTGGCTGCAGCTATCGtcattgaaaatatttacgAGCTAGTTTGGCGGATGATTCTCTCaagtaaccaaacaaacaacaaataaataataataattaaaaaaaacaataacaaacgcGTTCCCTTTTACAACGAGGTTGCCGCAAGGAATTTGACATTCTGAATAGTATCCTTTTACAGCCCCAAAACGTTACAGGATATTTTTAAAAGCCCTCATTAATCTTTTCATGTCGAAGAAGAAAGTAAGATCGGGCTTCGCTTTGCTTTACATTTAGACTTAACTTGCACGGGAGATTTGACTTAACCAGCTTTTTTATTTGAATAGGCAGATTTTAATTTGGGAAAAATGTTTCAGCAAAAAAGCGGCGCGAGCCCTGTGTAGGTGTTCCCCTCCTCCCCACATAGATCCACTATGCACCGAAGGGTGAGTCGCTCATCACTGTGACTGTGGATGAAATGGTGTCGACTGTGTTTTGCAAGTTTGAAGAATGTTACACCAAAAAGGACTACAGCATACCTGTTACCATCATTGCACATCAGTCTTCCGTGACTAGCTCACGTGGTCTGGTGGTTGAAGTGGAGCTTCAAGATTTGGTACAGCATCGCATTTTTTGCACTTCTTACACCATGTTTCATGCACCATTCTTTCACATCTAGACATACATCCCTAGCCACGACTATCGATCTTTCACTCTGTGGTCTTCTTATGATACAAATGACTAGATTTATCGTGTAAGGAGTGGATGGCGTTTTCACGCATCGACTTTGGGAGAACTACTTGCCACTGCCATATAACGTTATTTGCGGGCTTCCATCTCCGATAAACTACTCCATCTCTCAGGCTACAACGATCATACTGATCATACAATTTACACAGTTCACTTCCCTTGCCCATCACAGTAGATGTTTGGAGTTCCTTTCCATGCTCAGTCGAATTCCTCAGCTGTGAGATGTTAGGGTCGATCGCATCATCTTGGACGTTGTTAACTATTTACAACGATAAACGACTCAAGACATCTGCATGGTATGCTTCGAACCGACACGATGCACAATGACGAGACGGTAAGTAGACAACTCAATGGCTATCTTGTCGCCTCTACGACCACTAGAATCATTCCTGGATCAATGTTTCTGTTGCCAGTCAAGGGGTTGTGGCCGGTCACCACTGTAACGTAAATGTCGACCAGCCAAAAAGGAGCGAAATGGCGTGTACTCCAAATGATTGCCCACTACTCCCTGTCATAAGTCACCCAGTTTCGTTGAGAAGCACTTAGGGATTTGCTTACATAGGCAACTACATGTTCTTTACTCCATACACATACTCCCTTGCATGGTTGGATGCATCACAGTCAAGACTAAAAGAGTCAATCGTGGGTACACTACAAATGGAGCCGTTGTCAACCGTTGACGCAATTGCTTGAATGCTACCTCACATTTCTGGGTCCACTGGAATTTGGCTTTGGATCCAGTTAGTCGTTACAGTTGCTCAGCAATAGTGGCAAAGCTGAGACAGAACTATTGATAATACGAAGCAAGACAGAAGAAACTAGGTAATTTGCATTGACATATGgcactcggtcgttcatttcgACTATCGTGTTACGGATGAAAAAGTCAAGTAAAAATCCCACGATAACAAGAGCTAAGGTAAAATACCTTCAGTAATCCGTGGTAAATCGACCCTCCCTTAATCAAATATCA

Protein

Uniprot

Uniprot term	Description
P56433	4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5 OS=Pan troglodytes OX=9598 GN=FUT5 PE=3 SV=1
Q8HYJ4	4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5 OS=Pongo pygmaeus OX=9600 GN=FUT5 PE=3 SV=1
Q11128	4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5 OS=Homo sapiens OX=9606 GN=FUT5 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00852	Glyco_transf_10	Glycosyltransferase family 10 (fucosyltransferase) C-term	Family	Interproscan
PF17039	Glyco_tran_10_N	Fucosyltransferase, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038577	Homologous_superfamily	GT10-like, C-terminal domain superfamily	Interproscan
IPR001503	Family	Glycosyl transferase family 10	Interproscan
IPR031481	Domain	Fucosyltransferase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48350	ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006486	Biological Process	protein glycosylation	Interproscan
GO:0008417	Molecular Function	fucosyltransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14464	FUT-1, FucTC; alpha-1,3-fucosyltransferase	EC:2.4.1.-	Various types of N-glycan biosynthesis	ko00513	deepkoala