Gene detail

Detailed information of XP_020615227.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2393:310705...336364
NR annotation: XP_020615227.1, follistatin-A-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020759568.1

AAGCAGGATAATACTGCGAGTCAGTCGTTTGGTTTGTTATAACGGAACACAGTGGAGTGCTCGTTGCTAAACATATGTAAGTGAAGCAAACTGaagaaaactgaagtcaattttaCTGTGATGAGAGTGAAGCCAACAAGTCAAACAAACATGCTCCCGAGGTCTTTAGGAACGAACAGTCCTGTTACTTTAATAGTGATTTATGCCATATTGATTTGGCCGTCGATAGAAGgtgGCAAGACCTGTTTCCTGAACCACGAGTGTAAAAGAACGGACCGGGTCTATCATGTGAGCCCCATTAACGATTGCTGTCAGTCTCCACAAAACGCAGGCGGAAACTTGTACTACCGCAGTTCCAACACCTCAATCCCTTTCTTCTTGCAATTTTTTCAAGCCTGTTTACCGTGTGGCCCGCGAACAGTTAACACAAACGCATCTGAGAGCAAGGTAGAACGTCCTCCCGATAAAGTCTGTACGGCAAGGGCCAGGATGATGCCGAACGGAcagttgaaatgtttttgtagtGGCTGCAGTCGCAGACAATACCAGCCAGTGTGTGGCAATGATGGCGGTAACTACAGCAGTGAGTGCGAACTTCGAAAGAAAGCTTGCCGTCATCGTAGATCTGACATGGAGGTGGCTTATGAGGGAACATGCCAATACGGATGCGATAAGGTGGTGTGCCGTAACAATGGCACTTGTATGGTTGATCAGTACAAGCGTGCCTCCTGTGTTCAAAGCTGTGACTCCCTCTGCCCCAAACGTGCGAAAAAAGATGGGCCCCTGTGTGGTGCTGATGGCGTTCAGTATGAAAGCAGTTGTCATCTCAGGAAAGAGACCTGCAAACAAGGAAAAGCTATTGGCATGGCTTACAGAGGCAAATGTATTGTAAACGCGTCATGTGACAATATAAACTGTGGTAACAAACTGTGTGTTGCGGATGCTTCCGGGAGACCTCGGTGTGTCACGTGCTCCTGTAACATGTCCGACCCAAGAAAGGCTGAGCGTGGGTGTTCGAAAAACCTCCAACCCATGACTCTGTGTGGCACTGACCGAAAGACTTACCAGGACTACAGCAGTTTGCGCAAGGAAATGTGCAAAATCAAGACATTTATTGATGTGGATCATCTTGGAGCTTGTAAAGGTGACAAGGCAGTCCAAGGTGAGAGGCCTGGGGACGAACCGCCAGATGAAAGTTCAACTTCCGGTGAATCGATGACTACGGACGACATAGGCCAGTACTACATCTCCCTCAAacattttgtgaacattttgaaaaagaagtatGGACTGGATATTGCAGCACCCAAGTACAAAAAAATGGACCGTAGGGATAAAATAGTATTAATGAGTACACTCATAAAAGCATTGAAAAAGAACTGGCGAAAGGTGAAGCCTTACCAGTAAGTCCGTGATTTCAATGGTTTCTGGGTGAATCGGTCGATTAAGTCAGAGATCCATGTGGTTTGGAGACGAACGTAGGACTAGGGtaatttgtgtttaatttacaaattgGAGTGTATGAAACTTTTTTGCTAAGATATTGCTTTGATGAGAGAAAACAATCATGATGCGATCAGGCGGATCCAGGAATTCCTGAAAGGAGAGGGAGGGGGTTGTCCACCTTAATAACTTTCGACGCCATCGGCTGGATGGGAAGCGCCGAAGGCGCGAGATTCTAGAGGTGGGGAGCAGGGCAGAGCCATGCCTCCCCGGAAGATTCTTCCGAATTTTACCCTCTAAAACGCCATTTTCAGCATTCCTGACGCTTGAAAAGGGTTTTTGAAGGCATGATATAAAATCTAGAGGTTACCTCACTTCTCAACCAGAAAACCCAATTACGGGTAGCAACCGTTCCCATACCAATCAGAGTATCTTCGTTTTCTCTCCCTACAATTTTCGCGCGCCATGAATGCGAAAAAGAAGACTACAACTCAGAGCGATTTCTAAAGAAGAACATTTAACTTTTAAGTTCGTATGACGTTTGTATGAGACGCCATGTTAATCAAATGGTAGAATTTGAACAACTTAGTCGTTGTGCGTGGAAAATATATTCATCGTCAGGGATGATTTATTCCAGTGCGCTGTGTAATTTGTAGTTAACTCAATATAGCCTATTTATAGTCAGAAGTGGTCAATTTGTAATAATTTGTGATTTAGCTTACAGGAGTTTACGCTACAGCGTCATTTATGGTCTTCCACGATCTCTGTCATTCTTCTTCTTTTGATGGCTTATTGGAAACTCTTTAGGTTTTTTGGCTTAAGTGaactaaaattttgcaaatctttccttcaatttgaagaaaattctgtACATTGAAACAATGGCTTAAGATAGCTGTATTGTTTTGTCAGCATTTAGTATTTacaatagtaattggactgagtggagtgcaattcagggagtaatcgtgtgCGTAAATttaaaatcggacgagcgcgcaGCGTGAAGCCCATTTtgaattacgagcacgattactccctgaatattgcacgacacgaggtccaattactaattaatcgtatctataaaaaagatgtcttttgagaacttctttcaagaattttgttacagatacgatTACTCAGCACATTGTAGCCAGGCTTTTCATTCCCAAGATTgatgcataattaattattactaCTTGATTAGCGGTCCGTCTCTTATGCTAGGTATTGACTTGCAGGCCTATATCTAGGAACCTCAGATTTTATAAATGCATTGGACAACTACTAATATCTtctatttaaaataaagaaaaacgcaCCCTTATTTAGATAACCCGATAATGACAGCGAGTGCCGCTTAAAGAGACTTGTAATTCATCTCGTTACCAGTCTTACCCCTGCAGATCATCAAAAGCGAAGGCTCTGAGAACGAGTTTGACAAACTCGTGTCAAGTCCCGGCGGCAACGGCTCACTCTCGTGTTcgtttaaatatgaaaaatattacTTCTTTATCACGAAGCTACGAAATGTGGTGTGATGTGATTATCTTGTAAAGTGGCTCCTTACGAGAGTGCATGTCATATACTCaaagttttataaaaaaattattttcctacTTGAATGTcgtgtacatgtaatttattgtatttagcATTTTTAAGGTGTAAATTTATTGCAGTATGTACCTTTGTAAACCTTACCTTTTAGCAAGAAACGCACTTTACTGCTATTTTTGATGATTTTTCCACAATTTTGTATTTAGTAAACTAAGAAGAGCCATAAAATATatgtaatataatattattaaaatttgCCGTTTGTTTGTA

Protein

Uniprot

Uniprot term	Description
P31696	Agrin OS=Gallus gallus OX=9031 GN=AGRN PE=1 SV=3
A2ASQ1	Agrin OS=Mus musculus OX=10090 GN=Agrn PE=1 SV=1
P25304	Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002350	Domain	Kazal domain	Interproscan
IPR003645	Domain	Follistatin-like, N-terminal	Interproscan
IPR050653	Family	Protease Inhibitors and Growth Factor Antagonists	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10913	FOLLISTATIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030510	Biological Process	regulation of BMP signaling pathway	Interproscan
GO:0032926	Biological Process	negative regulation of activin receptor signaling pathway	Interproscan
GO:0048185	Molecular Function	activin binding	Interproscan