Gene detail

Detailed information of XP_020615748.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2446:427234...436101
NR annotation: XP_020615748.1, protein phosphatase 1 regulatory subunit 3C-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020760089.1

ACTTAGTactttgaaagcttttttttttttttttttcattttttttttcttctacttAAGTGTGAAGTAACGCAATTCCTATATTTGCATTACGCGCCACATTAGAATCCAAAGCTAAAGTCGTCAGTTCGGATACAGTATCTTCGGCTGGAAGAATTAAATATACCCTTTTAACCTAAAGAGATTAGAATTAGAGTCATAAGATAAACGATCGTTGCAAATTCACCATGACCGATGATTCAATTCTAACTAAACCACAGCCTTGGAAAAGCGTGACAGTTTTCATAGGTACGCATGTCGTGCAAAGTCAACATAACACAAGGTCAACATTACTCGACAGCCCTCTTGACAGTTGTCCGTTACTCGCACAGCAATGAAAATGAACGGACAGGTTAAAGACTCTAGGCCGACTTCTACAACGTCCAGGGTGAAAAGAGTTTCGTTTGCGGATTTTGTTGGCCTAAAACTTGAGTTTGTGAGAACCATTACTCCCTCCAGCAGCGAAGACAACTTATGTACACTAGAGGACGCGTTATGGAAAACCAACTGTGACGACACTGAGGCACCAAAGAAGCGGGTAAAATGTCTGTACCCGTGTTTCGTTCAACCTTCAGAATCAACAGACAGTTTCATGAAGAGGGTTTACAGCCAGAATGTGTGCCTCGAGTACATCGTGTGCAATAACTTAGTTATCACCGGACTTATTCGGGTGACAAATTTATCTTACATGAAAGAGGTGACTGTCAGATTTACACTTAATGGATGGGAGACGTATCAAGACGTTTGGGCGGATTTCATGTCCACTTGTTTGGATGGCAGAACAGAAACGTTTAGTTTTCGTATCTCAATACCTCATGACTTTGAAGTAAATCGGTATATGGAGTTCGCAATTCGCTATCGCGCCTCAGACAATGAGTTTTGGGATAATAATGGCCGTAACAATTACCAAGTTCGGTGTTCAGAAAGGCTCCTTTTACAAACGGAATAAAACGATAAAACGAGATTGCTTCTATGCAACAGAGCGACCATGGCTGGCATGTGCTTTTCGAGCCGGCCTTTCTGATTTATCCGAGAAAAGCAGGTTGACTAGAAATGTTTCTTAGACATTGTTTATGAACACTTCCCTTAAAAAAATTAGTTGTACCAATATAACAATCTAAACATTTCCCCTTGAGAACTACAAAGTGTGTATCCTCCGACAAATTTCGTTGAGTCTTAGCCCTTTGCATAGACAGACAATTGTTATTTCTGTAAAGCAAGAAGGCTTCCGGTCTTTGTTATTTACATTATCTCTGTAAAAACGTGCACGATATCATGGTCATACATATTTCTCCAACGTCTTCATTATTTAGTTTGTCACACTgatcttgatatttttcacttGGTCGGAAAATACATTAGTCACAGTTTGAAAACCGTATCATACGTAACTTGAAATGCTATGCAAAATACATACTTAAGAAAACAAGTCAACATCAAGACATTCGCCTTTGTATTCAGgaaataattttgcaataataAATTAGCAAGAAGTCAACAGTCAGTCAACCATGTTGTAAACGGTTAGTTTATCTCACTGTGATGTAGACTGAGtcggtcaaaattaaaaataatgtagATTGTATTTCTTTATGTTGTATTCCGTAGGAAATGCTGAAATATTTATGTTCATGTCATCTATGGTCATGTCATGTATTTTAGGCAACTGCAATTGCTAAAACAACTGCCACTGACTAAACATCTACAACACACACTGGCTGTACAACATCAGGGCCTAAATAAAGACATTTCAGTGATGCGAGCTGTGGAGAGACAATTTACCAATACTTTGTAAATGTAGAAAAGCCATCAGTGCGCAGTTTGTGAAAGCCCACTAACCATGGTAACCGAGAATAGAGTAACTGACTTGCCTATGGTATAatagcctagaacaacaatgagTTTATTGGCAGCCAATAGCGGTTAAGAGACTACCATAGATACTGATGTTTTGTAAACTACTCTCCTGTTACGCCCCGGGTTGTGGGACACAAGATACAGTAGTAGCAGACACCGCGTGTAAGAAGCTAGTGGTTTGAGAACCTAccggcagaaatttgccattttaaaaccaaaaaatagaAGAACCCGTTCAGCCAAGctagatcaagcaggttcttatatacGGGTTACAGTTCAATCATGATAAACcttttaaccaaggagtgtgactttgagattgcaaatttatattacaagaaaatacaaaatacagtaGAGAATAAATACTATATATTTAAGGATTAGGCCCAAGTTtattcactttgtttgtttgtttgtttgtttttttgtagtCAACAACTATacctccttcatagaaattaaggaCATTGTTAAGAATATACTTACAGAACCTATTTGGCCAGACTTAGAACAATAAGGGCTCTTACTCACGGGTTTTTGCTGTGCCACTATCCATTCTTGGGTTACGTTCTGGTGACGTTTTGGTTGTGCTCTTTGATTAAACTCTTCTGTTGTATCAAGTTTTGTCTGTCCTCTCGGTCTCCGAAGACTGTTTAGTGTGCTGTAACAGATCTAGCTAGATCTCTGCCTTCCCACAGCTAGCAAGTTGTCCCGTTCAGAAACGTGTTTTCTCGGGCCAAAAACCCATTATTTCAGAACTCCCTGGACAATTAACATTAttggtaaaatttgaaaacgacaagaagcgaagaaaaagaaaaaatgagaataaaaatgccTGAAATTGCGAAATAATAAAAGTGCAAGTAATTATGAACGtttgttaaaaagaatgttaaaTCTTATAACATGTTTTATTCTGGCTTAAgcccttcaatatttttaatattttcaatattttcagctttctttCATGTTGAGACCACCAGGTAGTAAAAGATTATTCTCTGCCTGCCTAAGGCCCGGAATCAGCCAGTTTTTGTCACTATTACTCCGGCATAAGTCTTGATCATTTTGCCTTACTATTATGCTCAAACTAACGCCGGCATAATTTGTAAAACCCTAGATACAACTTAAGCGACAGTGGCAGAGTTGGTGTTTGCGGTTTTAGCTACAGATCTAGAAGACAGATGATAATAActtcaacaacaattttttttttctaaatgctTACATTTTGGAGGGTATCCTCACTGATCTAAGAGATCTGTGCACTCTGTGATCAGTGGACTACGCCCTAAGAGGAACCGATATGTATTAACTTACCTGAACCATCAAATTATGGCCTGAACTCTTTTAGTTCTTTAGATGTTATGTCCTTGAGATCCGTCGCCGAAAGAGCTGTCCTTCATGAAACAATTTCACCAAAGCAGACGCTGACTATGTAATTTTAACTAAGCCGTATTTTT

Protein

Uniprot

Uniprot term	Description
Q9H7J1	Protein phosphatase 1 regulatory subunit 3E OS=Homo sapiens OX=9606 GN=PPP1R3E PE=1 SV=2
Q8BRJ4	Protein phosphatase 1 regulatory subunit 3E OS=Mus musculus OX=10090 GN=Ppp1r3e PE=1 SV=2
P0C7L8	Protein phosphatase 1 regulatory subunit 3E OS=Rattus norvegicus OX=10116 GN=Ppp1r3e PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038175	Homologous_superfamily	CBM21 domain superfamily	Interproscan
IPR005036	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan
IPR050782	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069	Molecular Function	glycogen binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07189	PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E	-	Protein phosphatases and associated proteins	ko01009	deepkoala