Gene detail

Detailed information of XP_020615771.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2449:280068...291073
NR annotation: XP_020615771.1, transmembrane protease serine 6-like isoform X1 [Orbicella faveolata]
Species abbreviation OFAVE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_020760112.1

ATATGCGAGCACGTCCACAGATACCTGTAGAAAATGGGTTTCTTGTTACAATCTTGATGAAGATTACGTTGCTTCATGCCGCTtgcatttctcttttttcttgcaGGGCTTCACTCTAACGCCTTCACAGCAAAAGACTGCTGAGCTGACGTCATTTGAAAATATCTCAAGACAAATTATCTTGTTTTGCGTTGAGAAAAAGTCAAACTCCACTCAGAGCAAGCACGATTAGCTTTGTGGAATCAGCGATGACCCTACCAAGCCACTTTCTCGTATTTTTCTTTGGATTGCTGGCGTTGAGAGCAGCAGAAGTGAGCTCCTTCGGAAGAAAGACAGTCAAAGcTCTATTAAAAACATGCGACGATCCTGGTGTCCCAAAGAATGGCTTCCGTGTGGGAGAAGACTTCGACTACAAAGCCAAGGTTGAATATTTTTGCAATCCGGGATTTAGACTCACCGCAGGGACCAGGTTACGACAGTGTCAGCAGAATAAAAAATGGAGTGGAACCTTGCCAACTTGTGAAGATATCAACGAATGCATTGAATACGAAGATTACGAAAACCCTTACACCACCAATGACGTGCAGGTCGAGCACAATCATCTATGTCACGCGAAGGCCACGTGCTTCAACACCATTGGGTCGTTCTACTGCAAGTGCAAGCTGGGTTACCATGGCGATGGAAAGTTATGCTTGTCTAGTAAATACCGAATGGTTGCTGCTCTGTTCCGAAAAAAGACTAAAGTTTCACCGCACACTTGTGGTACGCTGGGAAATTCAAAGAATGCGACACGCATCAGACGGATTGTGGGAGGGATATCCTCAGATTATGGAGCCTGGCCCTGGCAGGTCGCCATCAGCTACAACAGCACAAGAAGAAAAAGCTATCTCTTCAACGGAGCGCTCATTAAACCAGGGTGGGTTCTTACAGTAGCAAACGTTCTTCAAGTCAAAAAGGGCGTAACGCCCATAAAACCCAACAGACTTCAAGTGATATTAGGTGAATTCAACCGTAACAAACTGGACGGTACTGAAACGCCAGTCACCGTGAAAAGGATCGTTTTGCATCCGGGATACGACCGAACTACTATGGCCCATAATATCGCTCTGTTAGAGTTGGAGAAGCCCGTTAGGCTTAATGACCATATTAGGATGGTATGCGTCCCAAAACGGAAACGAGACAAGATTTTAGAAAAGCCACTTCAGTTTGGTACAGTGGCAGGATGGGGTTCAACTAAAGCAATCAGGCTCGGTGAACCTACTGGACCTTTGTCTGCCGAACTAAGACAGGTTACAGTCCCGATTGTCCCGGATAAAGAATGCAAGGAAGCTTCAATTTATTCGTTTGACAAAGAAACCACGTTGTGTGCGGGCTTCAAAAAGAAGCCAAAAGATCCCTGCTTTGGAGACGTGGGGAGCCCCCTCGTCATGCAGCAGCCACGCTCTGGCCGCTGGATTGTAATTGGACTGTTTGGTTGGAGCGAAGGTTGTGGAAGACCAAGAAAGTATGCGTATTACACGAGGGTGTCAAAGTATAGGAAGTGGATAAATTTCATTGTCAGAAGCCGCCAGTAATTGGAGGGAGTCTCAACATTCAAATATTTGCGCGTCAGTTTTGTACCCTGTTCAGAGATCGTCAGAGTGTAAATCTGATATTTTGACTTACTGGTTCCCTTTAAAGAAAATGATGATAGCATTATAAGCCTTTAGGTTTAGTTGCTTACTGCATTTTTGAGGAATCGACGCACCCCTTGTTTCCATCCTTTATTCAGTGAAATGTCGGGACATCGTACACGACATGGAGATTTTTGTATAGGCTCCAAGTAGCTACACGTGTGCATATAATTATACAGACGTGATAACGAAGTTGGGTTGCATTTCTCGTCTTGTTTAAAACGATCGGTTTAAACTTGTCGGCACATTGATCTTTGGAAATACGCAAAGACCCAACTTTTACAACATCAACCTAACCAGAGAGAGGAAGTCAGACGATTGACGTTTCAAAAATGCAGTAGGCCCCCTAATTAAGGTATATTTCAAGAGAATGTTACTGTACGAAGCCATGGAGCTTAAATTCACTCGGTCAATACACTCTCCGAGAAGCCTTGTTAATATACGAGTACCGCTACTTTTGAATACCAATTAGCATATACGAGAATTTTTGCATTGATTATTCATAGCATTGCTACGTTTGCATTTGAATTGGAAtcttttatttatattttataacgtttttttcaatgtcattctttaaaaaaaacggTGGACAAGCCTCCAAAGAAACAAACTCGGGGGTAGACAAAATCAACTTCATATTGTTCAATTTTCATAGCGCTAGCTGTTACGCTTTATCAAGTCACAGTCGTCAAGCATCATACCTTCCTTGTCATACTACTATGTTTTTGCCTTGGTGATTAGTTCTTGCACCCTCCTAATCAGTAAAGTAGCGGCATAACGACATCATGATATAACCACTCAATCGCTTATGATCGGCATaaagaaatcaagaaaagatcagtttttttttccttaactcGTTATGAGTTCATGTTATGTTGttattatgtcgttatgttcacactgcaaacataacttGATAACGTCCTTTCTATGTCGTTATGTCTCTAGCTGAACTAGGCTTAACTTTCAGTGTTATAGTGCAGAGAATAGAAGACTtatgaaatgtgaaaggtgaattcATCAACATAACACGACCGTGGGACgaattgtcatgtttatcaattcacctttcacatttcattaccgagcttaaaattctccatctttattcacttatagAAGACTCAATTTTCTAGTGTCATGAAACTAGTAACAGCCAATACAGTATTTATGTTGCTATACCCAGCTTGTGACACTACTTTCAAAGTAATATTTCCGTATCAAGGGACACCAAAGCTTGATTGTTTAGAGCGCTATTGAGGATTAGTGTGAATTTTTCATTCACGTTTTCTAACTTCGTAGCAAAGTGTAGTGTTTATCGTTTTACCCTTAGTTTTGAAAAATGACAATAACCTCGAGTAGAATTGTTCAGCTGGACAACTGGACTCAAGTGAACATTTATTATGGGCTACCCAAAATTGCTCTTGTTGTGAATGAAAAGAATAACAGACAACTCGATCTGACCATTCGCCATATTTGGAAAACGGTTTGGATATCGTTCTCTGTCaacctttttcatttgcttatttCAATACGTTTTGTTACACATATCTAATTgataagtttttttgttgttagttTCGTCCAGAGGGAGCGACACGGTTGAACTACAAATCGAGTTTTTTGTTTGCATAAAagataattgttttaaattatcttAGTCGAGAGCACGAACAATTGTTTAAACATTGGGTTTTTTCGGGTTTTTTGTGGGTGGAGAGTTTTATCTTCATTTACTCATGCTGCGACGAAGAAGGACAAGGAAGTTTGGTGAATTTCCAGATTAGCTCAGTTTGTGAGAAGAAACTGCACTAGACTCGACATGGTGAAATACAATAAAGATTGGCGAGCTTTCTATGAAAGCTTTTTTAGATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14272	Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1
P26262	Plasma kallikrein OS=Mus musculus OX=10090 GN=Klkb1 PE=1 SV=2
P16294	Coagulation factor IX OS=Mus musculus OX=10090 GN=F9 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007325 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12947 all species →	EGF_3	EGF domain	Domain	Interproscan
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00089 all species →	Trypsin	Trypsin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR024731 all species →	Domain	EGF domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR001314 all species →	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR001254 all species →	Domain	Serine proteases, trypsin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24253 all species →	TRANSMEMBRANE PROTEASE SERINE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_020615771.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.