Gene detail

Detailed information of XP_020615877.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2450:1425754...1431291
NR annotation: XP_020615877.1, collagen EMF1-alpha-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q17RW2	Collagen alpha-1(XXIV) chain OS=Homo sapiens OX=9606 GN=COL24A1 PE=1 SV=2
Q80ZF0	Collagen alpha-1(XXVII) chain OS=Rattus norvegicus OX=10116 GN=Col27a1 PE=2 SV=1
Q8IZC6	Collagen alpha-1(XXVII) chain OS=Homo sapiens OX=9606 GN=COL27A1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR050149	Family	Collagen superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24023	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0030020	Molecular Function	extracellular matrix structural constituent conferring tensile strength	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan