Gene detail

Detailed information of XP_020616168.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2473:1017829...1045749
NR annotation: XP_020616168.1, tyrosine-protein kinase Fer-like isoform X2 [Orbicella faveolata]
Species abbreviation OFAVE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC110054173

ATGAATTGGAGAGACCCTCAAGTCACAGTCTTTCAGGCATGGTGTACATATATCTTTGAAAGTGAAAGCAAGGCAAAACTGATTACAGAATTCAGCAACCTCTTGAATTCTACTACAGTAAAAAGACTTGACCAGCTCATAGAGGACAAAAGAAACTTATTAAAAAAGTACAAGAATGAGAAATTTAGAACGGAGAGCAGCTACAAACAAGAATGTGATGAAATTGACAGACTAAGGAAAACATACCAAGAAAATGCCAAAGACTCTGAGACAGGGAAAAGAAAATATGAAGAAGTTCTTTCGAAGGACAAATTTAACAATAAGGACTGGGAACGATCTAAAGATCGATATGTGAGATCGACTCTCAAACTACATCAGAATCATAATGATTATGTACTGGCTCTGAAATCAGGAAACTGTCATCAAGGATTTTACAATGATATTCTTGTTCCAACAATGTTGAATTCTTTGCAATACTTACAAGAGGAATACATTTCCCAATGGAAGGATCTTCTCCAGGATGCAGTAAATCTTACAAACTGTTGCCGTGAGGAGTATTTGACATCAAGCCAAGCAGTACAAGCTAGTGTTGATGAAGTAAAAAAGGATAAAGAATATGCCTCCTTTATCACCAGGCACAAGCAAAACCAGGCACCAGCTTACCCATTTGTGTTCGATTCAGCTCTCATTGAACTGACATCTTCAGGAGTTATTGCTAATGAACTGCTTGTCAATGATTTGACATTAGAAAAACTTCAACACAAGAGAGCACTGCTCAGTAATGAACTTGAAAATGTGGAACAACAACTGGAGGCTAAAAAAGCAGAACTGGAACAGGAAACCAACAAGCTCCAGGCTGAAAAGACTGGGGGCAGCAATGAACACTTAAGCATCATTCAAAAAGAGCAGACTGTCGCAGTTCTCAGTTGGCATGTGGATGACCTGAAGTGCAGTCAAACAAAACTGCAGAAAATGTGTACCATGATCGGATCTGCTCTGGACAAACTTGGTAATTCTCAACCTTCAAAGTTTGCAGACCTTTCTGCTCCAGGATCACCATCAGGGGAATTTGGTCAGTCAACACCTGAGATCAGAAAAAGCAATCGAAAAATACCAACACTTTTTAAGAAAAGAAAGACGGAGAGAGAGAATTCTTCAAGCAACTGTGATTCCAAACCTCGACGATACGTGGCGTCATCCAATGAAGAGAGAGTGAATGGAACTTCAAATATTGAAGACTCCGAAGATAGTGAGGATGAAGTCGCAGGAGAATACCTCGAGCCGAATGATGAGATTGCCCTTGAGGAAGAGCCGTGGTTTCATGGCACGATTGATCGTAAAGAGATAGCTACCCTACTGAAGAAAGACGGAGATTATCTAGTGAGAGAAAGCTCATCAAAACCCGGACAGTTTGTTCTGTCAACTCGGAGCACCGTGGACGGCAGCCAGAAGCATTTTATCATTCAATCAGAGGATGGCTTAGTACGGTTTGAAGACCAGGGCTTTCCCAGTATACGAGAACTGCTCGATTACCACGTAAAAAACAAAGTTCATGTGACAAAGAAGTCAAAGACCGTCTTGGTAAACGCCGTGGAAAAACCTGGAAAAGACAAATGGGAAATGTGCAGAGACGACATTGTCCTACAGGAGAAGAAACTTGGTTCAGGTCATTTTGGAGATGTGATGAAAGGAATTCTAAAACCTTCTAACACTCCTGTCGCTGTTAAATCCTGCAAGGGAAATGTTACGCAAACGGTGAAGCAGAAGTTTCTGTCGGAAGCAGAGATCTTGAAGCAGTATGATCATCCTAATATAGTCAGACTGATAGGAGTGTGTGCTGACCGAGAGCCTGTTTATATAGTCATGGAATTCATGGTCGGTGGAGACTTCCTGTCTTATCTTCGTAAAAATGGCGCTAAGCTGGACTCAAAGAAACTAGCAAAGTTTAGTGTCGATGCAGCAGCTGGTATGGAGTATCTGGAGAGCAAAAGTTGCATTCATCGAGATTTAGCAGCACGAAACTGCTTGATTGGTACAAAAGATATACTCAAGATCTCGGATTTTGGAATGTCTCGTGAAGTCGAAGAAGTTTACGAAGCTTCAAATATGAAAGAGATCCCTGTAAAGTGGACTGCGCCCGAGGCTCTGTACTATTTCCAGTACACCACTCTGAGTGACATATGGAGCTTTGGAGTGTTGCTTTGGGAGACATTCTCTTATGGTAACACGCCCTATCCTGGCATGAATAACAAGGAAACCCGTGAAAAGGTTGAGAATGGCTATCGCATGCCTGCACCGGCGGACACACCTCCGGCAGTGTATCAAATCATGAAAGATTGTTGGAATATTAACCCAGATGCAAGGCCACGCTTTTCTGAAATTCTAAGAAGATTGAAGCAAATCCAGGAAGTTCTCTAA

Transcript

rna-XM_020760509.1

GAAGAATAAACACCGCTGCTTGTAAGGTTATCAACGACAATGACAAAGAGAGCCCGATTAGAAAGGAATGAATTGGAGAGACCCTCAAGTCACAGTCTTTCAGGCATGGTGTACATATATCTTTGAAAGTGAAAGCAAGGCAAAACTGATTACAGAATTCAGCAACCTCTTGAATTCTACTACAGTAAAAAGACTTGACCAGCTCATagaggacaaaagaaacttattaAAAAAGTACAAGAATGAGAAATTTAGAACGGAGAGCAGCTACAAACAAGAATGTGATGAAATTGACAGACTAAGGAAAACATACCAAGAAAATGCCAAAGACTCTGAGACAgggaaaagaaaatatgaagaaGTTCTTTCGAAGGACAAATTTAACAATAAGGACTGGGAACGATCTAAAGATCGATATGTGAGATCGACTCTCAAACTACATCAGAATCATAATGATTATGTACTGGCTCTGAAATCAGGAAACTGTCATCAAGGATTTTACAATGATATTCTTGTTCCAACAATGTTGAATTCTTTGCAATACTTACAAGAGGAATACATTTCCCAATGGAAGGATCTTCTCCAGGATGCAGTAAATCTTACAAACTGTTGCCGTGAGGAGTATTTGACATCAAGCCAAGCAGTACAAGCTAGTGTTGATGAAGTAAAAAAGGATAAAGAATATGCCTCCTTTATCACCAGGCACAAgcaaAACCAGGCACCAGCTTACCCATTTGTGTTCGATTCAGCTCTCATTGAACTGACATCTTCAGGAGTTATTGCTAATGAACTGCTTGTCAATGATTTGACATTAGAAAAACTTCAACACAAGAGAGCACTGCTCAGtaatgaacttgaaaatgtgGAACAACAACTGGAGGCTAAAAAAGCAGAACTGGAACAGGAAACCAACAAGCTCCAGGCTGAAAAGACTGGGGGCAGCAATGAACACTTAAGCATCATTCAAAAAGAGCAGACTGTCGCAGTTCTCAGTTGGCATGTGGATGACCTGAAGTGCAGTCAAACAAAACTGCAGAAAATGTGTACCATGATCGGATCTGCTCTGGACAAACTTGGTAATTCTCAACCTTCAAAGTTTGCAGACCTTTCTGCTCCAGGATCACCATCAGGGGAATTTGGTCAGTCAACACCTGAGATCAGAAAAAGCAATCGAAAAATACCAAcactttttaagaaaagaaagacgGAGAGAGAGAATTCTTCAAGCAACTGTGATTCCAAACCTCGACGATACGTGGCGTCATCCAATGAAGAGAGAGTGAATGGAACTTCAAATATTGAAGACTCCGAAGATAGTGAGGATGAAGTCGCAGGAGAATACCTCgagccGAATGATGAGATTGCCCTTGAGGAAGAGCCGTGGTTTCATGGCACGATTGATCGTAAAGAGATAGCTACCCTACTGAAGAAAGACGGAGATTATCTAGTGAGAGAAAGCTCATCAAAACCCGGACAGTTTGTTCTGTCAACTCGGAGCACCGTGGACGGCAGCCAGAAGCATTTTATCATTCAATCAGAGGATGGCTTAGTACGGTTTGAAGACCAGGGCTTTCCCAGTATACGAGAACTGCTCGATTACCAcgtaaaaaacaaagttcatgtGACAAAGAAGTCAAAGACCGTCTTGGTAAACGCCGTGGAAAAACCTGGAAAAGACAAATGGGAAATGTGCAGAGACGACATTGTCCTACAGGAGAAGAAACTTGGTTCAGGTCATTTTGGAGATGTGATGAAAGGAATTCTAAAACCTTCTAACACTCCTGTCGCTGTTAAATCCTGCAAGGGAAATGTTACGCAAACGGTGAAGCAGAAGTTTCTGTCGGAAGCAGAGATCTTGAAGCAGTATGATCATCCTAATATAGTCAGACTGATAGGAGTGTGTGCTGACCGAGAGCCTGTTTATATAGTCATGGAATTCATGGTCGGTGGAGACTTCCTGTCTTATCTTCGTAAAAATGGCGCTAAGCTGGACTCAAAGAAACTAGCAAAGTTTAGTGTCGATGCAGCAGCTGGTATGGAGTATCTGGAGAGCAAAAGTTGCATTCATCGAGATTTAGCAGCACGAAACTGCTTGATTGGTACAAAAGATATACTCAAGATCTCGGATTTTGGAATGTCTCGTGAAGTCGAAGAAGTTTACGAAGCTTCAAATATGAAAGAGATCCCTGTAAAGTGGACTGCGCCCGAGGCTCTGTACTATTTCCAGTACACCACTCTGAGTGACATATGGAGCTTTGGAGTGTTGCTTTGGGAGACATTCTCTTATGGTAACACGCCCTATCCTGGCATGAATAACAAGGAAACCCGTGAAAAGGTTGAGAATGGCTATCGCATGCCTGCACCGGCGGACACACCTCCGGCAGTGTATCAAATCATGAAAGATTGTTGGAATATTAACCCAGATGCAAGGCCACGCTTTTCTGAAATTCTAAGAAGATTGAAGCAAATCCAGGAAGTTCTCTAAAAGTGTGATTTTGTACCCTCTTTATGTTCGCCTCAATGTTGGAATTATTAGCATTTTTAGTTATTATGAAAATATGGTCATAGTCAACCCAAGCTACATTTAACAGGTTACAATATCGCGAAgaattatttttgagaaatgaAATTGTCAGATGCCAAtacaaaatacttttttgaaGCATAGCAAAATGTCCTCATTGTACATTTGGCATGTGTAGTTATTATAAATTTTAGTCTTCATACATTAGTAACTTTTGAGTGGCTCACAAGATGAACTTGTTAGGCCTCGTCAAATTCCTTGCGTTAATTATATaatataaatagaaaataacTAACATATTATGTTTCTATCTTTAAATAAGATCATGTAAACACACGATGACTTTTAAAGAGCTGAAAAGTCTGTCTAAACCCTCTAATGCAGCTCATTTCAGGAGAGTGTTAGAACCGAATTTAAAACAGGTTTTAAATGCGTTTTAAACGCGTTCAGACTGTTTGTTTACCAGTGGTCGCGAATGTGAGTATTTTGTATGATAATTTAACTGCAAATTTCGATATGTACGGCTATTAAGATCAACCAGTATAGAGGGTTATATCGTTTTCAGTATTTATTTGGTTTAAGTCCTTGTTCGGTTGTTTTTAAACATTCAgtgtaaaataacttgtttttaatGTGTCCGCTCGAAATATGTCAACTTTATTCGTAGTCTTGTTAAGACagcgtccacaccacgccggaagaatttgaaaacgcagttttgtTTCTACGGGCAGGCTTACGGTCCACACTCaatccgccacgaaaacggagcttttcgaaaacgctcttcaaaccggagaaatttgaaaacgccgggttttcgttttcg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P16591	Tyrosine-protein kinase Fer OS=Homo sapiens OX=9606 GN=FER PE=1 SV=2
Q9TTY2	Tyrosine-protein kinase Fer OS=Canis lupus familiaris OX=9615 GN=FER PE=2 SV=1
P70451	Tyrosine-protein kinase Fer OS=Mus musculus OX=10090 GN=Fer PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005203 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR016250 all species →	Family	Tyrosine-protein kinase, Fes/Fps type	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR050198 all species →	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR031160 all species →	Domain	F-BAR domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418 all species →	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004715 all species →	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan
GO:0018108 all species →	Biological Process	peptidyl-tyrosine phosphorylation	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08889	FER, TYK3; tyrosine-protein kinase Fer	EC:2.7.10.2	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.