Detailed information of XP_020616740.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2505:40897...218959
NR annotation: XP_020616740.1, nuclear RNA export factor 1-like isoform X3 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UBU9Nuclear RNA export factor 1 OS=Homo sapiens OX=9606 GN=NXF1 PE=1 SV=1
P58797Nuclear RNA export factor 1 OS=Coturnix japonica OX=93934 GN=NXF1 PE=1 SV=1
Q1RMS5Nuclear RNA export factor 1 OS=Bos taurus OX=9913 GN=NXF1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF09162Tap-RNA_bindTap, RNA-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR015245DomainNuclear RNA export factor Tap, RNA-binding domainInterproscan
IPR030217FamilyNuclear RNA export factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10662NUCLEAR RNA EXPORT FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan

TOP