Gene detail

Detailed information of XP_020618112.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2698:1204166...1206656
NR annotation: XP_020618112.1, XIAP-associated factor 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020762453.1

AGCAAGGCTTGTTGTGGACTTAATAAAAATCTCCCCTCGGCCAACACCGCGCCAACAGACTGACAAACCGGAAGTTATGGCAAACGAAATTCGCCTGGGGCACTGGGTACTAGCGCGTACCCGAAAGTTCGCGAAATTTCTGGTGACTTCTAGCTACTTCTGGATCTCTATGTTTCCAGCAGTTTCGAAAGATCTTGAGTGAATTAATGCAAAGTATAAATACGAGTCACCAGCAATGACCAAGCAGTTTGATTGGAAGTATTTTAATGTAAAGGCAATCACGGTTGTTCACCagcaaaagaagaaatcacagacaTGGACGAAAGAGAAGTGAAATGCGACAACTGTCAGAGACACGTTCCTTCCGAAAATTACCAGATGCATGTCGTTCACTGCAAACGAAATATTCAGATATGCTCTTTGTGTGGAGAAACAGTGTTGAGGAGCGAAGAGAAGGAGCACTTCAAGGAAAACCACGCAGAAATAAACTGCATTCAATGTGGACAGAAAACTACGAGAAGCGAGGAAGGGAATCACCTAGCAAACGAATGCGGTAAGAGACCGATTCCATGCCAGTACTGTGAAATAACCCTGCCGAGAGAAAAAATGCCAGAACATCAGGAATTCTGTGGATCAAGGACGGAATGGTATCACAATTGCAGTCGATACATTTTGATCAGAGATCTTCCTAATCACGAGAAATCTTGCGATGGAGGCGCTAGTCAGAAGTGTGCTATCTTGCCTTGGGAATTCTGCGGATCTTTAATCCCGCATGAAAACATTGATGTTCATCAACGCCAGTGTTTAGAGGAAAGCCAGGGCTCTCAAATACCTCTTCTTGTAGAGGGTGACGATGACTTTTTCCAAGAGATCGCAGCGACAAGAGGAAGAAGCAGTGACGATCACGAAAGACGTGGTCATATTTATTCAAACTCCGTCTCGCATGACAGCAACGAAGCTCCCAGCGAAGCTCAAGCAGAACGAAACAGTATTGTTGCTCTGCCGTGTGAAATCTGTGGCGAACTGTGCCCTTCAGATAGATTAATGAAACACCAAGAGGAATGCAGCCAAGAAAGCGAAAACACTGTGGACCCCACACGCTCCCGGAGAGAAGAGAACATCTACGGCAGCAATCTACCCCACTTCCGGTTTGCGAGCGCTCAGAGAAGAGACAACCTGGAATATTCGTTCgatgatttttctttcagggGATTTCCGTATTATATTCTAGCGAACGTTTTTCGCGACCTCGAAGACAGAGGAAGGCCATTTGAAATGATGAGAAATCTTTGATCCCACAAGGAGGAGACATTCAACGACCGAATTTTGTAGCACCTAAATATTACTGGTATGTTTATTGAAGACTTAAGACTACCTAAAACTGATGTCGAAAAAGGTATAAACGTTTGATATTATCGGAAACCCTTGGATTTCTgacattattttacaataaactgATAATATTTTAGACATCAATTTTGAGTACTAAGTTACAGTGAACCtacaaaaactgtgaaaaaagcCTAAATCAGCATATCCAAGCCTTTTGTTATATCAAATATTTGGAATCTACTCGCTCCTCTTCATTAAGATTTAAAGCTGACAATCGAAATAAAATGCGGGCATTAAGTTCTAGTTGGCTGCGGCTATTACTATGACATATGTACAACAGTTTTGTTTACTCATGTCTTTTGATATCGATATATCGAAACATCGACCCCGTTCCAAATGTCTGAATCCGCACACATCTTCTCATTGGCGGTATGTCTTGAATTTCTAGATGACCCAAagcggaaaataaaaaaataataaataaataaaaataaaaaatagatgtTAACATGAAGGAATATTTAATACAACACAGACGGTGGTTTGTAGTTTGAATAATTCGTGCACCTAGGTGTAATTTTTATGTACGCATGTAAACATTAGCTAGTcgagtttgttttttcttgctttctaATAGTGACCAATACAATATTGGTTAGCTAACGCAGAGGTTCGAATCCCGATGAAGCCCtgaaatataatatatttttgagCTTTATTTCCAATTGCTTATTAAATTGTGAACACAATTGCGATGGTCAATCTTCTTTTCACGATTTTAGCTTTGctacaacatttttaaaatctgaCTTTTTTGATGGTTGCGTTACTTCCGGTAGTTTTGATCACTTGTTGATCTTACCCAAAAACTATATACGTTTTTCTCgtacaaacttttaaaattaatgagaaaaaaaaaaagaggcgTAAGGCATTTCGGCAGAGTTACTTAAACTGAACCAAATAAAATGAGCTCTCTTACTTTCTCAATAAAGTTATTCGTCGTGTTCCTGTGGACGCGGTCGATTTCCAAACCTTGGAGCTCTGTGATCCGCTCTCGGCTGTACAGGTATCATTACAGCCACTAAATGCACGAGTCTTGACAGCATAATCAGCACAACGAGGGAGATATTGATTACGCAAAATGTAACGATGGACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21366	TRAFD1-XIAF1_ZnF	TRAFD1/XAF1, zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051986	Family	Innate Immunity and Apoptosis Regulator	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR049439	Domain	TRAFD1/XAF1, zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16295	TRAF-TYPE ZINC FINGER PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan