Gene detail

Detailed information of XP_020618432.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_272:41148...43388
NR annotation: XP_020618430.1, NACHT, LRR and PYD domains-containing protein 3-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020762773.1

TTACATGGAGTATCTTCTAGCGGAATCACTGAGCGCTGATTCTCTCCCTGTCAAAGCAAGTGACCTTTATTTTGaggttttcaacaaatttctaCTGGACCACAAGAGAAAGGAAATTCCATCTGAAAGCAGCACACTGGATAAGCTTTCAGAGCTAGCAGCTGAATTGCTTGTAAAGaagaagtttctttttgttaaagAAGACATGACAAAGTTTGATTTACGTGAAGTTGAAAGCCTGAGAGCAAGTGGCATTCTTCATTCTGGTCCTCCTTTCAGGAAATCTGCCTTTGAAGAGacgaaacatttttgtttcacacACCTTACTCTACAGGAGTATTTGGCGGCTCGTTGGTTTGTGGAGAGAGGAGAGATTCCCTCCACACGAAAAGTGTCTTCAATGGTTATGCAGTTCATGGCTGGTATTTTATCGAAGAAAAGAGACAATAAATTCATGGAGAAATTACTTGAAGTACTGCAATCAGATGAAAGCGGCTGTCGGGGCCTTCTCAacagagtaaagtgtctcgctGAGTATGAAGAAAAAGATTTCGCAAAAAATATCATAAAGAAACATTCCTCTCAATTCAAGTTTCGCAGATTCCATTCCTTAACTGATGTGGACTGTATtgctgtttcgtttttgttaAGTGTGTTTGGTGAACTGAATAAAGAAGACACTAAAAAACATAGACCATTTCCTGAGTTGAGCATCTCAAAGTCAAATCTAACACAGTCGGGAATAAAACGAATCTGTAAATCTTTGGAAAAAGAGTTTCGTTCCGTCAAAACACTGTCGCTGAGTAAGTGTGGCTTAAATGACGAATGCGTCGATTGCATCAAAGAATTAGTTTCAAGTAGATTAACTGAACTAGCACTGGAGGAAAATGAGATCACTGATGCCGGTGTAACCCGTTTGAGTGAAGCATTACAGTCACCAGCTTGTAAAGTAACCACACTAAACCTGAGTGGTAATCAGATCACTGATGAGGGTGTTACCAGTTTGAGTCGAGCACTACAGTCACCAGCTTGTAAAGTGGCCAGACTAAAGCTAGATGGTAATCAGATCACTGATGAGGGTGTTACCAGTTTGAGTCAAGCATTACAGTCACCAGCTTGCAAAGTAACCATATTAGGCCTCCAAAATAATCAAATCACCGAAGCCGGTGCTAGTAGTTTGAGTCAAGCATTACGGTCATCAGCCTGTAAAGTAACCGGAGTAAGTCTGACTGGTAATAAGATCATCGATGGCGGTGTTAAAAGTTTGAGTCAAGCATTAAAGTCATCAGCCTGTAAAGTAACCAATTTATACCTGAGTGCTAATCAGATCACCGCTGACGGTGTTCGCAGTTTGAGTCAAGCATTAAAGTCGTCAGCCTGTAAAGTAACCACACTACGCCTGGATGGTAATCAGATCACTGATGCGGGTATTGAAAGTTTGAGTGAAGCATTACAGTCACCAACCTGTAGAGTAACCACACTAGGCCTGGTGCGCATTCTGATCACTGATGCCAGTGTTATTAGTTTGAGTCAAGCATTACAGTCACCAGCCTGTAAAATAACTTCACTATACCTGGGTGAAAATCAGATCACTGATGCCGGTGTTGCCAGTTTGAGTCAGGCATTACAGTCAACAACCTGTCAAGTAACCACACTACACATGGGTAAGAATCAGATCACCGATACTGGTAGAGAATATCTTAGAAGTCTGAAGCACCAAAAACCAGATCTTGAATTAAAGTATTAGAACAATAGAGAGAAATGAGAAATCTTAAGGAAACGTTTTAAGCTGGATAGACAAAGTTCACAAGTCATTGCTGATATAGCTTTGGtgttgatttttttgtaaacctTACTTAAAATCTGTTGTTAGAATTCTTTAAggcaaaaaataattacaaacattttgaaccattaaaataatatttatttaatcagTTAATAATGACTGAGTCTTACTGCAGAGATTGTTGTAATGTTGAGTTCTTATGTTTTCCTTTGTGCCCGTAAGAAGTCGTAATCTTTGTAAATAAAGAGTTTGTTAATATCAATGATCGACTAAACTTCGTTTAAACTCTGTCTCGAGGTGGGGTGATGATATTTTAAACTAAGTCTAGAATTCGCTTTTGAATATTAGATACTTGAGGGGTTGGgtagaaaatatcaaaaaatccCTGTAAATTTATGAAACCAAAATGACAATGATCAAACATCGAGTATTGCGGCAGTAAGGCGTTTTTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR051261	Family	NOD-like receptor (NLR)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24106	NACHT, LRR AND CARD DOMAINS-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan