Detailed information of XP_020618497.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2721:291025...295283
NR annotation: XP_020618497.1, stromelysin-3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21692Interstitial collagenase OS=Sus scrofa OX=9823 GN=MMP1 PE=1 SV=2
P28053Interstitial collagenase OS=Bos taurus OX=9913 GN=MMP1 PE=1 SV=1
Q63341Macrophage metalloelastase OS=Rattus norvegicus OX=10116 GN=Mmp12 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR000585DomainHemopexin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

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