Gene detail

Detailed information of XP_020618893.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_274:1947926...1965098
NR annotation: XP_020618893.1, kinesin-like protein KIF6 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110056721

ATGATTGCTGAGACACCCATGAATCAAGCGTCCACCAGATCACACTGCATTTTCACCATCCATATCTCGTCACGTGATCCTGGATCTGCTACCATCAGACGAGCCAAGCTTCATTTGGTTGATCTTGCAGGATCTGAAAGAGTTGGAAAGACCAATGTGGGTGGTACTCTTCTCACTGAAGCCAAATATATTAATTTATCTCTTCACTACCTTGAACAGGTGATAGTGGCATTATCAGACAAATCAAGAAGCCACATTCCATACAGAAACTCTATGATGACCTCAGTTTTAAGAGACAGTCTTGGAGGAAATTGTATGACTACAATGATAGCAACATGTTCCCTTGAAAAGAAAAACTTAGATGAATCAATTTCGACATGTAGATTTGCTCAAAGAGTGGCCATGATAAAGAATGATGTACTGCTCAATGAAGAAATTGATCCTAAACTGCTGATTGCGCAGCTTAAGGCAGAAGTACAGAGACTCAAAGATGAACTGGCAATGGCGTCAGGACAGGAGTACACCGGCGAGCTGACAGAAGATGAAATGGACAGACTGCGCAGGGTGGTGAAAAGTTACATTGAAGACGGTGATCCTGACTCAGCTCTTAGTGTTGGTGCAGACATGCGAAAGATCAACTACTGCTTTCAGCTACTCAAGAGTCATGTGTTGGAAAGGAGCAAAAAGAATCCTTCTCCTCCCTCACAGAGGACCCCTGCAATCGATGGCGTCCTTGACAGCAGCTATTTGGGAAACCACTCGGAAGTGAACAAACTGAAAGAACTGATCCGACAGCGAGATAACGAGATAAACATTTTGGTAGGCATGCTGAAGAAGGAGAAGAAACGCACCGCGGACCTCGAGATGTCTGTAAAACAAGGCGGGGGGCGAATCCCAGACGGGACGGGTGGGGTACCAGACGGCATTAGACGGAGCACCAGTCAGCCCCTGAGTGATGATTCAGAGAGTGAACTGTCCAACTTGAGATCTGCGGGTAGAGCACGAGTGAAAGACAGACCGTCTTCAGATACCACTGAGAATCGTGCACACCCTCAAGCGCCCGGCGATGACGCCAGTAATCACAGGCCCCCCTCTGCTTACAGAAGAAAGCTGGATGAAATGTCAGTTGGACGTAAGGAAGCTTTCGAGACTTTCCGGCGAGACTATCCTCACAACGACACGATAGAGGAGAATAAAAGAACACTCAAGCAAAGATATGCGGAGGCTAAGAGACTCGGAGAGCAAGTGAACTCATCACGACAAAAAATAAATTCTATAAAAAGTCAAATCGAACAGCACAGAGTTCGTCGTTCAATGCAAGGTTTTGTTAATGGCACTGAAGGGATGGAGGAAGTCGATCCCGTGGAACAGAACTTAAGGCAAGCTATTGAGGAGGAAAAAGCAAAATACAAGGACAGCTTCACCCGCCTTCGGTCCCTCAAGACTGAGATCGAACACCTTCAGCATCTGCTAGAGAAATCCAAAGTCAAGATGCAGAAAGATTTTGAGATCTGGTGGGCAGAACAGGCGGCCTTCACCCAGCCACCTGATGAAGTGCGAGCAGCGTGGAAAACCCCTCCGATATCCCCCGTTCGACCTCCATCCGCCCCTCGGAGACGTGATCCAGACCCGGGTGGCTTATCAAATCCCCGGGGAGACGAGTCTTCCCGTAGCACCAGACCAGGGAAATTCGTATCCAAGCTACGAGCCGAGGCTCATCTGGCGTCTTCAGGAGTGGTGTCATCTGTTACCCGTCCGTCTGTTCATGGTTCCAATTCAGACAGTGGTTTAAGCAGCTGGTCGACATCTGCAGCAACAGTAGCAGCTGATGTATCGAGTGTGGGAATCGCCGCAAGAAATAAATCGGGTTCCTCTAGTGACGTCAGCACTGGTTCTGGATCAGTGAAACTGACTGGTGACACCCGAGCTGATGCCGACATCTTGGCTTTTATAAAAGCGAGACAGAATTTGTTACAGCAGCGAGGTCATCGATAA

Transcript

rna-XM_020763234.1

AGCATCCAGGGACAGTGTTCACTGCTCATATTTCCTACCTTGAGATCTACAATGAAAATGGTTATGATCTTCTGGATCCCAAGCATGAAGCATGCAAGCTGGAAGATTTACCGAAAGTGAACCTGTTTGAAGACAGTGACAATAATGTCCATCTGAAGAATCTTTCTCTACATCAAGCCAGTAACGAAGAGGAAGCTCTCAATCTTTTATTTCTTGGAGACACAAACAGGATGATTGCTGAGACACCCATGAATCAAGCGTCCACCAGATCACACTGCATTTTCACCATCCATATCTCGTCACGTGATCCTGGATCTGCTACCATCAGACGAGCCAAGCTTCATTTGGTTGATCTTGCAGgATCTGAAAGAGTTGGAAAGACCAATGTGGGTGGTACTCTTCTCACTGAAGccaaatatattaatttatctCTTCACTACCTTGAACAGGTGATAGTGGCATTATCAGACAAATCAAGAAGCCACATTCCATACAGAAACTCTATGATGACCTCAGTTTTAAGAGACAGTCTTGGAGGAAATTGTATGACTACAATGATAGCAACATGTtcccttgaaaagaaaaacttagaTgaaTCAATTTCGACATGTAGATTTGCTCAAAGAGTGGCCATGATAAAGAATGATGTACTGCTCAATGAAGAAATTGATCCTAAACTGCTGATTGCGCAGCTTAAGGCAGAAGTACAGAGACTCAAAGATGAACTGGCAATGGCGTCAGGACAGGAGTACACCGGCGAGCTGACAGAAGATGAAATGGACAGACTGCGCAGGGTGGTGAAAAGTTACATTGAAGACGGTGATCCTGACTCAGCTCTTAGTGTTGGTGCAGACATGCGAAAGATCAACTACTGCTTTCAGCTACTCAAGAGTCATGTGTTGGAAAGGAGCAAAAAGAATCCTTCTCCTCCCTCACAGAGGACCCCTGCAATCGATGGCGTCCTTGACAGCAGCTATTTGGGAAACCACTCGGAAGTGAACAAACTGAAAGAACTGATCCGACAGCGAGATAACGAGATAAACATTTTGGTAGGCATGctgaagaaggagaagaaacgCACCGCGGACCTCGAGATGTCTGTAAAACAAGGCGGGGGGCGAATCCCAGACGGGACGGGTGGGGTACCAGACGGCATTAGACGGAGCACCAGTCAGCCCCTGAGTGATGATTCAGAGAGTGAACTGTCCAACTTGAGATCTGCGGGTAGAGCACGAGTGAAAGACAGACCGTCTTCAGATACCACTGAGAATCGTGCACACCCTCAAGCGCCCGGCGATGACGCCAGTAATCACAGGCCCCCCTCTGCTTACAGAAGAAAGCTGGATGAAATGTCAGTTGGACGTAAGGAAGCTTTCGAGACTTTCCGGCGAGACTATCCTCACAACGACACGATAGAGGAGAATAAAAGAACACTCAAGCAAAGatATGCGGAGGCTAAGAGACTCGGAGAGCAAGTGAACTCATCACGACAAAAAATAAattCTATAAAAAGTCAAATCGAACAGCACAGAGTTCGTCGTTCAATGCAAGGTTTTGTTAATGGCACTGAAGGGATGGAGGAAGTCGATCCCGTGGAACAGAACTTAAGGCAAGCTATTGAGGAGGAAAAAGCAAAATACAAGGACAGCTTCACCCGCCTTCGGTCCCTCAAGACTGAGATCGAACACCTTCAGCATCTGCTAGAGAAATCCAAAGTCAAGATGCAGAAAGATTTTGAGATCTGGTGGGCAGAACAGGCGGCCTTCACCCAGCCACCTGATGAAGTGCGAGCAGCGTGGAAAACCCCTCCGATATCCCCCGTTCGACCTCCATCCGCCCCTCGGAGACGTGATCCAGACCCGGGTGGCTTATCAAATCCCCGGGGAGACGAGTCTTCCCGTAGCACCAGACCAGGGAAATTCGTATCCAAGCTACGAGCCGAGGCTCATCTGGCGTCTTCAGGAGTGGTGTCATCTGTTACCCGTCCGTCTGTTCATGGTTCCAATTCAGACAGTGGTTTAAGCAGCTGGTCGACATCTGCAGCAACAGTAGCAGCTGATGTATCGAGTGTGGGAATCGCCGCAAGAAATAAATCGGGTTCCTCTAGTGACGTCAGCACTGGTTCTGGATCAGTGAAACTGACTGGTGACACCCGAGCTGATGCCGACATCTTGGCTTTTATAAAAGCGAGACAGAATTTGTTACAGCAGCGAGGTCATCGATAACCGCAACTGGTCCTATTATCAAGGGAACCAAGATCAGTAACAGAGGCCGGCCCTCTATGCCAACCCCACCATGGACGGGCCGCTCTATCTGTTCACCAAAGTGATTGGCACCAAGCTTCAGATACACGAGGGAAGAGAAATATGAAACGTTTCGTTCAACACGTTCTCGGTGCTCATACCACGGAAAGACTGACTGTTGAGATAAATAGATTGCAATGGATATTTTTCTCTTCGGAGCAAACATTTCTATCCTCTGGAAATACAGATAACGAATGCTCTCAATTGCAAGAAAGTAAAGAACACATCGTTTTCGTTGGACGCGAAAAATGTGGcagattttaaaaatgtgttcacTACGCTCCTTTCCATTCTCATCCGTTAAGTGAGCTCAAATAAATAGCAAAGCGCGAATGAAAACA

Protein

Uniprot

Uniprot term	Description
Q6ZMV9	Kinesin-like protein KIF6 OS=Homo sapiens OX=9606 GN=KIF6 PE=1 SV=3
Q9WV04	Kinesin-like protein KIF9 OS=Mus musculus OX=10090 GN=Kif9 PE=1 SV=2
Q9HAQ2	Kinesin-like protein KIF9 OS=Homo sapiens OX=9606 GN=KIF9 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20198	KIF17; kinesin family member 17	-	Cytoskeleton proteins	ko04812	deepkoala