Gene detail

Detailed information of XP_020619239.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2753:946075...948245
NR annotation: XP_020619239.1, histamine H2 receptor-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020763580.1

CTCGCTGaaactggaaaaacaaaaaaacaaattgaagagCTCCAGCTACAGATGGCTTCGTATTTAGAAGACTATGTAATAAGCAACCTGTCATAACGCGTTATCAGTTTTAATTACCCTGCATCCAATATAtcaaaaaatttattatttttttatgtgtggtaattaaataaaaagaacataGGGGTGTGCGATGATACACGCAGTCGAACTTCCTCAAGACCTTTCAAGTTCTTCTCCTATACTTCAGTTTAGTTACGTGTGTACACAGGCGTTGCTTTCCACACGACGAAATTGCATATGCCAAAATATCgagcgaagtttgaagtttgaaacaaagaaaaaacaacaccaGGCGTCTGTAATAAACATCTGCCGGTAGAAGTGTCATCTATCACTAGTGTGCGATTGGTTGCCTAAAACCGTATTTTGTAATGCTGCCATGGGCCAGTGTTAATTATCCAAAAGACGCCAAAAGTGCGTTTCATCCACCTTGGTCCTCACAATCTGCAGATGGCGTTTTTGCGATCAATTTATACTTAGTacaaattaactcattttttcGGGTTTGACTGCTGTTAAAAACCCCTCTGTGTTTCAATTCATCATGGAATCGGCTGCGCTGAACTCAAACTTGTCAGAAAAAAAGACAGACATAGTGTGTTATAACATGAACGCTGACTACTTCAAAACTGGCGACTTTCTCGACTGGTATATCGCTAACTCCGTGCTCTGCGCAATCTTAGCCATCGCCACAACAATGGCAAACTTGTGCATTCTTATAATCATCTGGAGAACTTCCTATCTACACACACCTTCAAACGTCATTCTTTTTTCCCTCGCGCTGTCTGATCTTGGTGTCGGTTTATTGGCTCAGCCAGTGGCTGTGGTTAACACCGTGGCTAAAATCCAAGGACTCATCAACACGGCTTGTATTTCTGGAGAAGCTGTGGCTGCCTTATCGACTTATCTATGCGGTGTGTCTTTGTTAACCGTCACGGCAGTGAGTATTGATCGATATCTGGCGCTGCATCTTCACCTCAGATATAAACAATTGGTAACAAATAAGCGCGTTATAGCACTGCTCGTTTTGACATGGTTGCTCGTGGCTCTTGTTTTACTAACGTGGTTGTGGTATCCTCGGTTTATCTTAGGCTTAGGTATAGCTGTTGGCTGTATCTGTATTCTTATCACATCCGGTTGTTTCTTTCGTATCTACCTGGTTTTGCGATATCACTTTAGGCAAATCAGTATCCAGACCCATCCTAAGACTGAGAATCAGGAATCAAATGAAGCACTCAACTTGACACACTACAGGAAATCAGTCTTAGGCATGTTCATGGTTTATCTCGTCTTACTGTTCTGTTATCTCCCTTACCTCAGCGTGGCTTGTGTGGTGGCGGTACAAGGCATTAACACAACCAATCGGCTTTTGTTCGAGCTGGCGAGAACTCTTGTTTATGCGAATTCTGCTATTAATCCTTTCATATACTGTTGGCGTCTCCAAGATATAAGAACCGCCGTGTTACAACGTTTGCCTTGTGTTTAACGATTGACCTTCATCGATAGTCTAGGCTTGCACCATTTGTCCGGTCTTTCTTGCTTAAGGAACCAGTTCCCATTGCCGTTTGCAGAGTCGGGCATAAGGCCAGCAATCCTACAACTGCAATCATTTTTGCAATTCCGGTTTCTGCACTGCGCCAACTTCTTCGCGAATTCGATTGCTATGGGCGCCCACCGTCAACTAGATCGTGGAGATCGTTCTGCGTTTTAACAATAGAACTGGttagcttttaatatttttgttgaacattgtaattttttttttcagcaaggGTTTTCCTGAGGAAATATTCGATTATTATtaagagtgagtacaaataaatattaaaaggtTGAGCTCATGATTAGTTCAACCAGCCAGGAAACAGGTTTATTGAGTGGTGTGTACCAGACTGGTACGAATTGCTTATTGGTACTAGTAAAGGACATTAAACGCTCTGATCTGTTTTATACAGCCAGCGATTCCAAATAACATGATTGCTCTTCCGTACGGCACACTAACAAACACCCTGACACCCTGCTACTGAATAGCCTACTCGGATGTATCAATCTGCTTTCCTTGTCTCGTACTCATCGACAGGTTCGTCATATAAACACctgcttaaggt

Protein

Uniprot

Uniprot term	Description
Q5IS65	5-hydroxytryptamine receptor 6 OS=Pan troglodytes OX=9598 GN=HTR6 PE=2 SV=1
P50406	5-hydroxytryptamine receptor 6 OS=Homo sapiens OX=9606 GN=HTR6 PE=1 SV=1
Q9R1C8	5-hydroxytryptamine receptor 6 OS=Mus musculus OX=10090 GN=Htr6 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR050569	Family	Trace Amine-Associated Receptor	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24249	HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan