Gene detail

Detailed information of XP_020619306.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2766:278958...293129
NR annotation: XP_020619306.1, fructose-2,6-bisphosphatase TIGAR-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020763647.1

cttaaaaaatttgcaattttgacccaaaaGCCTTggatccatgttagaatattgatatatcaaacatggcCAATTATAGCTATGGTGTGAGACGCCAGATTGAGAGCTTTACGTTTGAACCGGGCAAGAGATAAAGAAGAAAGGCTTTCCAAATACTGTTTTCATTGCTCATGGGGTGTGCCAAAGATGTAAAATGTTCTTCCTAGAGGCAAAAGAATTAAGATATTGGGCATCCTGAGAGAAAGAGGGCATGCTCCATGCACTTTTCTTTTACCTCATCCGATCCACTAATTATGAAAGAGAATGAAGTGGTTATTCTAAATATGGCACCCAGGATCAACCTGTCAGAAATTGGTACCTAACTAAATTGGTAcctaaataaaaatgaatttaagcCGCACCTCACTGGGATTCTGTTTCCAATGATCAAActcaacccccacccccacccccgtcCCAACTAACGCCAAAAAAAAGCTTACAAGGTGGAGAGAAATGTTTcccatctttttgttttttgttctgcaATGTTAGGCCAGACAAAGTCTATAAAAAGTTTACCCTTTACTGGTGAGCCCCTACTCTATACTGCCAAGAGTAGACGCTTTCAAAACTTTCACGGCTTCGGTCAAAGTTGAACAGTTATCTGGCCGGTCTGAAAACAAGTGCTTTTTACCGAAAATTTTCGCTGGGAAAACCCGAACATTTCCGAGCACTAACccaacctagttcccagggtcttctctGCACTGACGTTGTCAGACTGAGACGTCACGTGAGTAAACCACCTCAGCCACCTCCCGTTCTcgaggagaagaccctggggacgagattACAATCAACTATGGCGGCAGTACGCGGAGCTGGCGATAGCAGTCCATACCTTCTTCTCACTCTTGTCAGGCATGGTGAAACTACAGAGAACAAGACTGATGTTATTCAAGgGCAGACAGACACATTATTGAATGATGAAGGTATTGAACAAGCAAAGCTTGCTGGAAACAAATTATGCGATGAAGACTTCTCTCATGTTTTCTCCAGTGACTTACAGAGAGCTTTTAAGACTGCAGAGGAGAttgtcaagaaaaacaatttctgctcTCACAAGAAAATTGTGGAGGATTCTCGTCTAAGGGAACGATGCTATGGTGTGGCAGAAGGAGTATCAAAACAGACGTTTATTCAAATGGCAGCTAATAACAGCATGAAACCAGGTGTTTTTACTCCGAAAGGGGCAGAAACCCTTCAAGAAGTCAAGGAAAGAGCAACAGAATTCTTGAACTTCATCATAGAAGAAATAGGACACTCACACATCGACATCAACAACTGTTCTAGTCACACCCAGACTGACAATTTCATTAGTAGTGAAATTATTGATGACTTGCAAGGCTCAGCATGTGAAAtgcttgaaaaacaaaagcagcaatcCCATTTAGCCAATGTTCTGATTGTTTCTCATGGTGGTGTTATACGGCAGTTGCTGCTCTACTTTGTTGATGATTTAGAATCTGATTTTCCAATTGGAGCCAACAGGCAACTCAGATTTGTATCACCAAACACTGGCATTTCAAAGTTAAAAATCTTTATAAATGAGGAAACAAAATTACCTGAATTTGTTAAGTGCATCTATTTACATAGTACAGAACATCTTGCAAAAGATGAAGGTTCTAaatgaaatttctttaattgttttaatctATTTAAATCATAAGACTTTGTTTGGctctgaattttgttttttatgagaTGTAATGATACGCAGCCAAAATTAAGTCTGTTTCACCAAAATGGGTATTTATTACTTTTGCTCGATATATTTGAATTTAGTGTGGAAATATTAGTTATTCATTATGCCATCCCCATAAAGCGTTTTGCTTCCATCCCCCTCTCTTTTGTAAAAGTGAGTCTGTCAGTTGGTAAAGGTAGTAGATAAGCTGACGAAAGAGGCATTGacaaattaacaatttattAATTCAATGAGCCTCGATTGTATCTTCCCCATGACTGCCATTTTACATTGGAGCCACCTTCACTCTGACAAAAAGGCAGTCTCAAACTCATGAATAATTCATtaactttaaacaaaggaaatcttgaccgtgatggtgtttggataactgatctaattagcatagatttttttacg

Protein

Uniprot

Uniprot term	Description
Q9SCS3	Phosphoglycerate mutase-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At3g50520 PE=2 SV=1
B6IYD3	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=gpmA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00300	His_Phos_1	Histidine phosphatase superfamily (branch 1)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013078	Family	Histidine phosphatase superfamily, clade-1	Interproscan
IPR051695	Family	Phosphoglycerate Mutase	Interproscan
IPR029033	Homologous_superfamily	Histidine phosphatase superfamily	Interproscan
IPR001345	Active_site	Phosphoglycerate/bisphosphoglycerate mutase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46517	FRUCTOSE-2,6-BISPHOSPHATASE TIGAR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004331	Molecular Function	fructose-2,6-bisphosphate 2-phosphatase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0043456	Biological Process	regulation of pentose-phosphate shunt	Interproscan
GO:0045820	Biological Process	negative regulation of glycolytic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14634	TIGAR; fructose-2,6-bisphosphatase	EC:3.1.3.46	Central carbon metabolism in cancer	ko05230	deepkoala