Gene detail

Detailed information of XP_020619553.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2795:63145...75194
NR annotation: XP_020619553.1, uncharacterized protein LOC110057304 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020763894.1

TTACactcctacctccccataaATACCACCTCTCTataacggccactttcctccgTCCCATTCTGTAAACCAGCCTTAACTGACAAGTTAAATCAAATAATACTCTTTTTGAGTGATTTTCTTTCTATCTTTGTCTTTCATCCTTTCGTTCAGAAAACCGCTCTCAACTCTCAACATGGTTTGCTAATGGCTTGCACTTAAAGCAAACTTGCGATAAGAGGAGAGAATATTGTCAGTTATTGTGAAAATTTATTCCGCGGTAAATATCACGCCCAACGCGAGGGCGTTGGTCATAACGTGACCTTCGTCACGGAAGCAATTTGATGTCCTCTTTGATAGAAAGTATACATACCAGTACATTAACTTTTGTTTGCGTGAAGTGCATCGCTCTCGTTAGACAGTTATATGCTGGGTACTTGAATTTATTTGCATCGCTTGGATTACGTCACACGTTAGTATATCATTGAAGTGAGCGCAACAGACTAAAACACTCTCGGAAATTGAATGCAGTATGCGGGTTGAACGCTTCATATATGTGCTGATCTGATGGACCATTCTTTGTACTCGAGGTATGCTCACATTTATATTCTTTCTTCGTAAAAGGAACACCGCAATCGCACGCCTTTCGTTGTACTCGTTGTGTTTCCCCCTTCAATGAACATGACCCGGCaaacaattcttttcaaaagttaaaattacATATAAGGCAGAGGAGGTGGTGGAAACACAttttaagacggattccgctcaaagatCGAGCAATAAACGCAAAAAtcatttactaaaaatctactcatagcacggtaacttttggaatattATCTAAAACAACTTAATTTCTCTAAGGTGTGACATTACATAATTCCATTATGTAATGTCACACCTGAATAGCTAAGCGTATTACACAATAAACTTGTATTGTTGTATTGtctgttttaagtgaaatatggataacttcaagttcaattttatCTCGCGGGATCAGCTTGAGAGCtaaagtctcgataagttcttcttaactgtattccaAACAATACTATGCCATGAGGCTTTTTTGGTAACTTGGACATGAGTTTGATTTAAAAGACAATGAACGTGTAAGAAAAACTCATTTgaatatgaaaggttgtgcaccaagactcgtttttaAACAGAGATAacagcaactcggaaatggcttattcGAGCTAAGTTGCATCACATTTTACATCGATGATGAAACTTTAAAATCAATTAGGAAGTTACAAATATACTCATGTAAGATGGACGACTAGTTGCCAAATTGTTCGGAAATTACGATGGCGATGTTGGTTTCTCTTCTTGCTGTCTAGAAGGAAGAGCTGCTTTAATCAGGTGTTCGATATTATACTGATCCCGGCAGCAACATGAACGTGACTTTCTGTCTGAAAAGTCGGCAAAGTAACGCGTCCTACTGAATCCATACGACCACAAAACAGATCGAAACACGTGTGCCTCGGCGAATGCCATCGCCGTTTAGGTAAAGGCGTACACACACCTTGTATCCATAGCGACTGGTAAAGAAACACGGACTGCAAACGGACACCTGTTACCTTAACCGCGTCGTTTTCTCTGCGAGCATAATCAGAAATCTTCCACAGAATCTATCCGTCATAGCTTGAGAATTCTTGTTGTCTCAAGATCAGTCAGTGTTACATTTCTCAAAGCGCCAGTGTATGCTCGATAGACTCTATCCTTCCTTCTTGCCTCCTGATTATCTGCTGGTTGGTATCAAATTGCACAACTTCACCCACATCACACCTTACTTCCTCTACTCAGTTCTACTGTACTCAGTCTGCGAGCAAATACGTGCATCGCCTCTTTTCGTATTAGAGACGTTCAACTGGGGTTCCCCATACTACCAAAGCAAACAATTGAGCTCGGCTCAACCAGCTTTCTACAAAAGATACAAAACACCACCTAATTTTTAAACTGACGACTGCCAGTATTCCAAAAAGTATTCCTTTATAAAGTGCCGTGATGTTTTGTTACTACTTGTCAGGATATTGATCGAATATTACTTTTGTATGAAATGCCTATCCACAATCAATCAATATTATTCTTTGTTTGCGATATTTTCACTTTCGTCTTCATCAGTTTACGGTACATAATTTCGGCAAGCTAATCCCAAACTAAATAACGAATTTATTTACAATGTTCATGAATTCTACGATAAACAGTCAATATTGATAAAAGCTGCTAATCTGCTTGAACGACAGAGCATGTTTGAAATCACATTCATGATCAGTAAgcgataaaaaataaagaaacatcacgactaaccaatcaacaaaagcaGTAGTTTGCATACAGCATCTCGTTCTCCTTATACCTTGCGAAAGACCAACCTCTACCGACGTAAATAGTGCCGCGAAAAAAGTTCTCATTAGACATGCGCAAAAGGGAAAATCCACGAAATCGCTTGGTATGTTATGGAATGCGGAGTGACCAGTATGCGTCTAGCTAATTTTGGCATACTGATGACGTGCTCTTGGATAAATCTCGTATAGCATTTAACCTTGCAGTCAGTCTGTCATCAAAAGCTAAGCGTAGCACTTCTATGTAAACTTAGCGGTCAAATCATGAAGCACTTCTTAACCGATTTTCATGTTTTCGTGGGTCTTTGGCTCGTAAAAGTCGCAGTGGCACTCAATGACAGCAAGCCTTCTTCGACGACGAGAATCCACGAAAACGTTACTATGCCCTGTCCCGCGTTACAAGAAGTGGTTAGTAACGACGGGACTTTTGACATTATGTATTGGTCAATTTGCACATCAAGAAGATGTGACCACCAAGGCACTACATGGGATTGGATTGCTGGTATGAACAATAAAGGAATCACACAAGTTGGACCAGAAAGAGTCAACATCACGACGGATGGAGCTCTGGAAATTCACAAAGTAAACCTGAGTGATACTGGGCAATACATGTGTACAGTCAAAACAATCAACCACTCATCGCCTGGAATATATCATACAACTCTTGTTGTCATTGAAGCAGCTAACCGGTGGGACAAGAGAAACCCAAAGCCGGACACAAAGGACTGCGAAAAAGATTACTCAGACGACAGCAGAAATCTTATTTACACTCTGGCGATAACCATCTGTGTAGTATCTGTACTTCTGGTTATCGCAGTGGGATATATAGTTTATATAAAGCGAAATTATCTCCGCTGTTGGAACCAGGGGAATTCTCCAGCGTGAGAAGGTGTCGCTGGTGCGGATGTAGCGTAAAAGGagataaaaaacaagaaaacaaaaacaagaaaacaaaaaaacaattaacaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07686	V-set	Immunoglobulin V-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013106	Domain	Immunoglobulin V-set domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21668	CD200R; cell surface glycoprotein CD200 receptor	-	Kaposi sarcoma-associated herpesvirus infection	ko05167	deepkoala