Gene detail

Detailed information of XP_020619785.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2818:343695...361213
NR annotation: XP_020619785.1, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020764126.1

ACAGACAGGGGACTCGGGACGCGCTGGTACGCGCGGGATTCCGCCCGCGGATTCGGGACTAGGTAGACTGGTCCACCAAAACTCGGTCAGCGGAAGctttctaaaaacaaaatggccgaaGCCGAAAAGGCATCTGTGGTGCAGTTTAGTGGCGGCGAGAGAGAAGtcattgaaagaaaattagaTGCCTCTACCGATGCTCTAGATACAAGGAAAGACATCAGTGATTTTTATGAAATTTCGAGATGCGTGGATGTCATAAAAAGTCGTGGTTTTGAGAAGGTCGCTCTCCAGTTTCCGGACTCACTGTTAATTGACTCTGCAGCTGTTGCTTCATTGATTGAGAAAAACACTGGAAAGAAAGTATTTGTGTTGGCTGACACTTCATATGGAAGTTGCTGTGTAGATGAAGTGGCAGCAGAACATGTTCAGGCTGATGTGATCATTCACTATGGCAGAGCTTGTTTGAGTCAGACCCGGAGACTTCCAGTGTTGCATATATTTGGCAAATGGCCAGTCAGCATTCCAAGCTGTTTGGAgaactttaaaaagttatttccaGATCCTGCAGTTAAAGTGGTGGTGTTTTCAGATGTGGTATACAATCACTGCATGGGAGATGTCCAGAATGCTATCAAATGTATTTATCCAAATGTGATATTCACAAAGTTGACTTACTCCGCTTTTGAAAAGGAAGAGAATTTTCCTGCAAATCTAAATCtagaaaataagcaaaatattGAAGAGGGCAATCCTCAGGACATCACCTCTACAACGAAATTACTAAGTAACTCAGTGGAAACAGATGTTGACATGGCTTCACCAGAAGACAGGAATGAAGATCCAGTAAACAATGGCTATTTTTGTAGATTTGGACGAGAATTCAGTATTCCTACAGATGCACAGTTGGAGGAGTATAATGTGTTTTACATTGGTGGGGAAAGTTTGTGTTTAAGAAACTTAATGATGTCCTATAACAAATGTCAGttttattcATATGATCCATGTACCAATGTTGGAAGAAAAGAGACACTGAATGTCAATAAGGCACTTATGAAAAGGTATTACATGATCCAACGAGCTAAAGATGCCCAAGTAGTTGGAATTGTGGTTGGAACATTAGGAGTAGctgaCTACTTGAAAGTTATTGAACGAATGAAACAAGTTATAAAGATGGCTGGAAAAAAGTCTTATTTATTTGTCATGGGGAAGCTTAATGTGGCAAAAATGGCCAACTTCATGGAGGTCGATGTGTTTGTGTTAGTTGCATGTCCTGAAAATACACTGATTGATTCCAAGGAATTCTACAAACCAATAGTGACTCCTTTTGAAATGGAGATAGCATGCCTAAGAACACGAGACTGGACAGGAGACTATATCACTGATTTTAGAGACCTTCTACCAGGGTCAAGTGTCTCTGTTGATCTGGTTGGGGAAGAGAGTATGGACGATTCCAGTGACATACCAGATGTATCTCTAATAACTGGGCATTTAAGACCCACGTACAAATCATCAGACGTGGAAACAGGAGTTTCTTCATCATTGGTTGAGCGGAATCAAGAAACAACTTTGTCGACTCAGCACCACACTTCAGCAGTGGAATACCTTGCATCCAGATCATGGAAAGGACTGGAACAGAAACAAGGTGAAACGCCTGTGATTAAAGCAGTACAGGGCAGAGAAGGCATTGCAGCTGGGTACTCACACGAGAAGGGCCTAAATCAAGACAGCCAGGAAAACCCTTCCAGTCAATGATCAACGGGGCATCTTTATGGGCAGGGTCCAAATGAAAGAACAGTGGTCAGCTCCTGGATCGGGGGTGTGgcacattaaccatgaggccaccacgtcACTTGTTCTCCAGCTTTATGAAAAGCAAAAGGAACCTGGATTGTTGTTCGCCGATCAAATGTTATAAAACTCACGAAGCGATGATGCTGTCATGGAATAATTCTCAGCAACTTGTTGTCTTGTCTTTTTTCCTTTAGGAAGTCGATAGAAAGGTCTTGGGAACGAAGTTCAATTTAGACAGGTCAGAGAATTCAATTTCTAAATGGCGTATGTTGAAGACAACCATGGTTAAAGAATGAAACTCTTGTAAAAAAAAA

Protein

Uniprot

Uniprot term	Description
A7SKJ3	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Nematostella vectensis OX=45351 GN=dph2 PE=3 SV=1
A4QN59	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Danio rerio OX=7955 GN=dph2 PE=2 SV=1
Q6DE00	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 OS=Xenopus laevis OX=8355 GN=dph2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01866	Diphthamide_syn	Putative diphthamide synthesis protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042263	Homologous_superfamily	Diphthamide synthesis DPH1/DPH2, domain 1	Interproscan
IPR010014	Family	Diphthamide synthesis DHP2	Interproscan
IPR042265	Homologous_superfamily	Diphthamide synthesis DPH1/DPH2, domain 3	Interproscan
IPR016435	Family	Diphthamide synthesis DPH1/DPH2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10762	DIPHTHAMIDE BIOSYNTHESIS PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0017183	Biological Process	protein histidyl modification to diphthamide	Interproscan
GO:0090560	Molecular Function	2-(3-amino-3-carboxypropyl)histidine synthase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17866	DPH2; diphthamide biosynthesis protein 2	-	Translation factors	ko03012	deepkoala