Gene detail

Detailed information of XP_020620207.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2850:477351...497224
NR annotation: XP_020620207.1, intraflagellar transport protein 80 homolog [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q8K057	Intraflagellar transport protein 80 homolog OS=Mus musculus OX=10090 GN=Ift80 PE=1 SV=1
Q66HB3	Intraflagellar transport protein 80 homolog OS=Rattus norvegicus OX=10116 GN=Ift80 PE=2 SV=1
Q9P2H3	Intraflagellar transport protein 80 homolog OS=Homo sapiens OX=9606 GN=IFT80 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24098	OUTER SEGMENT 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0030992	Cellular Component	intraciliary transport particle B	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan