Detailed information of XP_020621758.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_295:604611...623396
NR annotation: XP_020621758.1, neurogenic locus notch homolog protein 1-like isoform X3 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R172Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus OX=10116 GN=Notch3 PE=2 SV=2
Q04721Neurogenic locus notch homolog protein 2 OS=Homo sapiens OX=9606 GN=NOTCH2 PE=1 SV=3
G3I6Z6Neurogenic locus notch homolog protein 1 OS=Cricetulus griseus OX=10029 GN=NOTCH1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00066NotchLNR domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF06816NODNOTCH proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR008297FamilyNotchInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR000800DomainNotch domainInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR010660DomainNotch, NOD domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0050793Biological Processregulation of developmental processInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02599NOTCH1; Notch 1-Endocrine resistanceko01522deepkoala

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