Gene detail

Detailed information of XP_020621867.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2953:1094031...1099060
NR annotation: XP_020621867.1, fibronectin type III domain-containing protein-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020766208.1

CACATTTACTCAAATATGCTATCTGATTTACTATCAGTACCAGGCCCTCCATCAAACGTAAAAATATTTCCATTCGGAGAATACCTACTGGTCACGTGGACACCGCCCAAGGAGCCCAACGGGATCATTACGAACTACCAAGTGGGGTCCGCTGAGTACAGTGCGTTATCGCCCGAGAGTGTGGTAGTTACCATGGAGACAGTACAACCCAATGTATATAAGAAATTGTTGGGTAATGAGAGATTTGAAACAAGCTATGTTGTGGAATTGCGAGCGAGAACGTCGAAGGGCTGGGGTGCCAGCTTAAGAACAACTACAACAACTATGAAAAAGTCAGCTCCTGCTAAGCCAGAAAAACCCACTGTAGTCGTAACAGGAGAACCGGCCGCGTTTAATGTGACGTACAACTTTGGTGTCGGAGGTGGATGGACACACGAgttcaaagttttatacaaaaagaaaggAGAAGGAGAACAATTTCAGGAAACTGCATGGGTGGATCATTTCCGCATGCAGTCTACTGTAATCAAAGATCTGGACTTTGCCGCGCTGTATGAAATCAAGACTATTGGTAAAAACACTGTCGGAACAAGTCCAGAAAGTAACATCACTGAAGCTTTTGTAGCGGGCGACCCTGTTGTCGGTAAAGCTGTTGGCTCGCCGATGTATGAGTCTGATTGGTTCATCACACTCATCATTGTCTCAGGCtgcgtttttcttcttttggtgATTGTTGTTCTGGTTAAACGTCACAGACGAAGGCGTAGCTTGAATTTTAGAGTTGCCGAACACGagaaggaaattgaaaatgaaaaagaaaaagaaaaagagatccCTGCCCGTGTCGACTTCAAACCGCGCGAGGACTGGAGAGGAAGACTGGAGGAGGCCGACCGCGAGAGTCACGACAGCCTGGATGAGTATGGTAGAACGGACGCACATTTCACAGAAGACGGTTCCTTTGTAGGTGAAATTAGCATTGATAAGCAGGAACCTTCACAAGAAGAGGTTAAACATCCAGTTGTGTAGCAGAGGTCCATAGGAAAGTGTTCCCTTGATCTCAGTTCTGTGAAGGCTGACGACAGTGTGGCGttcaaaaaaaatacatttttcgtTCTTTGATAATTGCTAGCTTTTCGCTACGAACTTTTTGctcagaattttatttcattgtatCTTTTTTGCGCTGTCTTTATTTGCCTATCCTCTCTCGCAATACTTCTCTAAAACGACTCAATCAACAGCCAAGGTAGCTTGTCACGCAAAACCTTAGAgatgcgttgcgtgacgataGAAATTAGCTTAGAAGTGCTGTCTGCAGCTGAGTAATTTAATGAGGACTCTTTCTATATTGTTGTAGTCGTACAAGTtgaggcaaaatatgaagactACACGTATCCCATAAAAGCGTTGTAAAACTGTTTTTCAATCTCGTTGTTTTAAGATTAAAATGCAAATCGTTTTAAGAATTTTCTCAGCCAGGGAAACAAGTGCGTTTACGAAAACCTTTATCGATGTGCTCGAAGGGGTTCCCATTcttatcaaccaatcagaaatagGACGAGCACACTCGAGGGATATCCGAACGTTGACACGTCAGTTTGCCGCCATTGAGTATACGTTTTGTTGCTAGGCAACTACGCCGAAAACTGCGGGCTCAGTTAATTCTCGGAGACGGTTCTGACTTGTAAAGGAACTTGTTTCCTAGACTGTATTTAGTCTGTAGTGCATTACTTAGGAGCGAGATAATCTTTCCTGTTTGATCACCATGCAAATATACACTAACATTAGCGTCCTGTTCACACTAaatcttaaacatatttaaaatgttttatgttgAAATATCTTGCAATGAAGATCGCCGCACTGCTGCTACGTAACAAAGTTTTGGAttaattttgagcaacttttcgacatttttttgacaactttctgatggccttagtttcaaatggccaatcaaaatgcagaaaCTCCGAGACGACATATCAAACGGAGAGTGTCGCCTCACATTTCAATAAGAGAGGATAAAGGGTAGGATAATACAGGACTAATGTCCAAGGTAGCCCTCTCCAGGTATTTAATTAGATCATTCCCGGTTTCAGAAATTCGAAGAAGGCCTGGAAGTAGCCAAACCAGAGACACGGATTTTGCTTACGTGGACAGCCCGTGACTTTTCACGCATTTTCATCCCCCAAGAAAACATCTACGCATGCAACGCACGTGGTAACAACCGCAGGAGAACTGGATACcagatctaaaaataacttgagaacaAGGCCTATGTGGATGGTTACCTCTGTTACCCTTCATTCTCTCTTGATTTCGACTATCTGTTCTTAAATGCGTACCTCTGTAGTAGATTTAGGTTATCTTTGCTTTGAAGTTGTAAATTTGTCGCCTTTCAATTGCAATGCTTTACCAAGATAGTCGCTTAGCGCAAAGAAATGTTACTTGTATACTGTCTGTTAGACAATGTATTAGGCTTTTGCTCAGGGTTGGACTGAAGCTCTTTACCCCCGGAGggtctcccatataaaagggcGAGAGTGCTAGTCGTACCTTCGAGCCGAaaacaatatgacaggagaCAATGTtcttttagaattggtacctcttagaggtgaaaaaaaaaaaaaa

Protein

Uniprot

Uniprot term	Description
B8VIW9	Fibronectin type III domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13882	Bravo_FIGEY	Bravo-like intracellular region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051622	Family	Receptor-type Tyrosine-protein Phosphatases	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR026966	Domain	Neurofascin/L1/NrCAM, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24051	SUSHI DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan