Gene detail

Detailed information of XP_020622103.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_2959:18224...45405
NR annotation: XP_020622103.1, DENN domain-containing protein 3-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110059719

ATGTTTCTTCTTTGTAGCCTGTTGCCAGAAGTTATGACAAGTGACTCACACAAATTCAGAATGGCCTTGATGCAGTTTGTATCTCAACTGGCCATGGTACCAGTCCCTCCGCCCGGCTCTCTTGGAATTGAATTTGAGCTGTATGGCATAAAACATCTTGTACGTCCTGCCGGATGTCCAGAAACCAGAGTTATTAATATGGAGCTTCATTACCCATTTCTTTACTTCTCTTTGGATGATATTCTTCTTCTAATAAGCTGTATTCTGACTCAACAACGGATTGTCTTCCTCTCGTCATCATATTCCCTCCTCACTCCTATCATTGAGAGTTTGTTCACCTTCATTCAACCATTTTCATGGAGTTGGACATATGTACCAATACTTCCAAGTGCACTTCTGGATCTGGTTGAAGCGCCTGGTGCATTTATCATGGGATGTCACTCAAGACACAAGAGTCAAATACAACGAGTTGTTATGGAAATGGACGAGTTGTCTAGCATAGTTATCGCAGATATTGACGATGGATCAGTTACTGCAAATTCAAGAATTCCACGACTGCCAACTTATGCTACAGACCTGTATAAGTTCAGAATGAAAAACGCAACAATCCACTTCGACCGGTCCCTCCTCCAAAGACAAACATTCTACACCTTACAAGAATGGCAAGAGGAAAGAGAACAGTTTGTTAGAGATTTTCAACAGCTTGTTTTGGCATCCACGTTAGAGATGATGTTACGAATGTTCAGTGACATGAAAAATTTCATTGTCCAGCAAGAAGATCTTTTCTTTGACATGGATACATACGTCGGGTCAAAGCCTTCAGATGACCAAGAGTTTTATCGTGAGGTATGCAAGAGTCACGCATTTAGCATGTTTCTCTACGACCTTATGCACGATCCAGAAAAGACCGACTACTTTACTCTCATGGCCCAGAAAACAAGAGTAGCTCCCAAGGCTGGACCTCTGAGAAAAAGAAGTTCCTCCACAGTTCCTGTCCCCGTTATATCCGAAGAATATTTTGACAACCCAGAGGAAAATCTAAGCACCTTTGTGTTGCCGCCATTTACCCTTGAAGGAATTTACACAAGAAGTTTCTACGACGAGTACTTGAAGTCACTCACTGCCAAAATATTGGATCGTATGAACCAGTCTTCAAGTCTTCTTGCCAACTACTTATATCTGCGTGGGATGTTAAGAATTGCGCGGGGACAGAACATCGAGGTATGTGTTATAAGGGTGCATGTTCTGGACAATGAAATGCGTTTTGTTGAACTGAAAATTTATAGGACCGTGCAAGAAATCATGTGTAAACTGGACGACCATGAATTAGGGGACCTACGAACAAGACACTTCTGGAGGAAAGCCGAGCACCTGAGAATGCAAGCCAAGGAAAAGGTAGACTTCAGACGGGACAGGAAAGAAGTGGTTACTTCTGCAATTCCGTCTACTCCATTGGTTCTTGCAGAGTTTGTGAAGCATGTCAGCATGCTACAGATTGCTAACAGTCAAGATGCCGGAACAAGACTGTTCGAAGCATTGACAGTGAATTCCAGTACCAAAGTGGTAGATCCGGAAACGTTTGCTGCATTCTATGAATCTTTCAGCCAGGCTGGTATTAAGGCCAAGAGTATTTTATTTCGTAACATTCTCTTAGGAGAAAATGAGTATGTGCTGAAGATCTCGCAGCATATCAAGACCAATGAGGGAATGGGATATCTTGTTCTCACAGTCGACAGGTTGTTGTTCTTGCCCGATGGAAGAAAAGACTGTATTCGTATCGTAGGGAATGAAGAGATCAAGAATGTGGAGCCATACTCCGAAAGCCGCCTTCTTCGTGGCGTAACAGCTATTAAAATAACCAGCAAAGTTAAGGGTTCAGTGCCATTTGTAGCATCTGTCAAGGAGGACGGAGAATCCTGGCGTAATTGTTTGTTGGAAATCAAAGCAGGATATGAGGTTGCCTCTGCTTGGAAGGACCCGCATATAATAAAGGAAGCTGCTCAAAATGTGATCATGGCAGATGCTCTAAGACAAAGTGACTACGCTGAGCAAACTGCAACGCTTGTCCTTTATTTTAGCACACTCAGTAACTTCAGAGAGCAACTGTCTGAACATACAAGAAAGGTACGGAAAAGATCGGCAATGCGTTTGAGAACATTCTACATGCGGTGTCCATCCACAAATGTTAAAGCGTCAAATTAA

Transcript

rna-XM_020766444.1

AAGTAGTCAATAAGAATACTTTTTTCAATAACTTCTGTAAAAGAGGACAACATCGTGAGGTGTAAccaaatttttcgaaaatttcttatcGAGAATTCCGTTCCATTTACTTTTCTCCCGGAATGTCCTGAAATTTGCAgtttggaaattcaagaattttcaGACTGAATTGCTGgaaactttcccaggaaatttctgCACCATTAGGCTCCTAAGTTTTGTTGAAAGGAAAGCGCCCgtcttgtttttttattaaGTATTAACTAAATGCGACCATTGTGAATTGTTCGTCATTGTTCACATCAATCACATGTGTATCTACATTGTACACCAAACATTGTTTCAATGTTTCTTCTTTGTAGCCTGTTGCCAGAAGTTATGACAAGTGACTCACACAAATTCAGAATGGCCTTGATGCAGTTTGTATCTCAACTGGCCATGGTACCAGTCCCTCCGCCCGGCTCTCTTGGAATTGAATTTGAGCTGTATGGCATAAAACATCTTGTACGTCCTGCCGGATGTCCAGAAACCAGAGTTATTAATATGGAGCTTCATTACCCATTTCTTTACTTCTCTTTGGATGATATTCTTCTTCTAATAAGCTGTATTCTGACTCAACAACGGATTGTCTTCCTCTCGTCATCATATTCCCTCCTCACTCCTATCATTGAGAGTTTGTTCACCTTCATTCAACCATTTTCATGGAGTTGGACATATGTACCAATACTTCCAAGTGCACTTCTGGATCTGGTTGAAGCGCCTGGTGCATTTATCATGGGATGTCACTCAAGACACAAGAGTCAAATACAACGAGTTGTTATGGAAATGGACGAGTTGTCTAGCATAGTTATCGCAGATATTGACGATGGATCAGTTACTGCAAATTCAAGAATTCCACGACTGCCAACTTATGCTACAGACCTGTATAAGTTCAGAATGAAAAACGCAACAATCCACTTCGACCGGTCCCTCCTCCAAAGACAAACATTCTACACCTTACAAGAATGGCAAGAGGAAAGAGAACAGTTTGTTAGAGATTTTCAACAGCTTGTTTTGGCATCCACGTTAGAGATGATGTTACGAATGTTCAGTGACATGAAAAATTTCATTGTCCAGCAAGAAGATCTTTTCTTTGACATGGATACATACGTCGGGTCAAAGCCTTCAGATGACCAAGAGTTTTATCGTGAGGTATGCAAGAGTCACGCATTTAGCATGTTTCTCTACGACCTTATGCACGATCCAGAAAAGACCGACTACTTTACTCTCATGGCCCAGAAAACAAGAGTAGCTCCCAAGGCTGGACCTCTGAGAAAAAGAAGTTCCTCCACAGTTCCTGTCCCCGTTATATCCGAAGAATATTTTGACAACCCAGAGGAAAATCTAAGCACCTTTGTGTTGCCGCCATTTACCCTTGAAGGAATTTACACAAGAAGTTTCTACGACGAGTACTTGAAGTCACTCACTGCCAAAATATTGGATCGTATGAACCAGTCTTCAAGTCTTCTTGCCAACTACTTATATCTGCGTGGGATGTTAAGAATTGCGCGGGGACAGAACATCGAGGTATGTGTTATAAGGGTGCATGTTCTGGACAATGAAATGCGTTTTGTTGAACTGAAAATTTATAGGACCGTGCAAGAAATCATGTGTAAACTGGACGACCATGAATTAGGGGACCTACGAACAAGACACTTCTGGAGGAAAGCCGAGCACCTGAGAATGCAAGCCAAGgaaaaggTAGACTTCAGACGGGACAGgaAAGAAGTGGTTACTTCTGCAATTCCGTCTACTCCATTGGTTCTTGCAGAGTTTGTGAAGCATGTCAGCATGCTACAGATTGCTAACAGTCAAGATGCCGGAACAAGACTGTTCGAAGCATTGACAGTGAATTCCAGTACCAAAGTGGTAGATCCGGAAACGTTTGCTGCATTCTATGAATCTTTCAGCCAGGCTGGTATTAAGGCCAAGAGTATTTTATTTCGTAACATTCTCTTAGGAGAAAATGAGTATGTGCTGAAGATCTCGCAGCATATCAAGACCAATGAGGGAATGGGATATCTTGTTCTCACAGTCGACAGGTTGTTGTTCTTGCCCGATGGAAGAAAAGACTGTATTCGTATCGTAGGGAATGAAGAGATCAAGAATGTGGAGCCATACTCCGAAAGCCGCCTTCTTCGTGGCGTAACAGCTATTAAAATAACCAGCAAAGTTAAGGGTTCAGTGCCATTTGTAGCATCTGTCAAGGAGGACGGAGAATCCTGGCGTAATTGTTTGTTGGAAATCAAAGCAGGATATGAGGTTGCCTCTGCTTGGAAGGACCCGCATATAATAAAGGAAGCTGCTCAAAATGTGATCATGGCAGATGCTCTAAGACAAAGTGACTACGCTGAGCAAACTGCAACGctTGTCCTTTATTTTAGCACACTCAGTAACTTCAGAGAGCAACTGTCTGAACATACAAGAAAGGTACGGAAAAGATCGGCAATGCGTTTGAGAACATTCTACATGCGGTGTCCATCCACAAATGTTAAAGCGTCAAATTAAAACTAAGCTTAAAATGTGCAAAACATAACTGTAGTGATTTGATTTAGAGCCATCCTTCCAATAATCAC

Protein

Uniprot

Uniprot term	Description
A2RUS2	DENN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=DENND3 PE=1 SV=2
A2RT67	DENN domain-containing protein 3 OS=Mus musculus OX=10090 GN=Dennd3 PE=1 SV=2
Q6ZPE2	Myotubularin-related protein 5 OS=Mus musculus OX=10090 GN=Sbf1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02141	DENN	DENN (AEX-3) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043153	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR051696	Family	DENN Domain-Containing GEFs	Interproscan
IPR037516	Domain	Tripartite DENN domain	Interproscan
IPR001194	Domain	cDENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12296	DENN DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032483	Biological Process	regulation of Rab protein signal transduction	Interproscan