Detailed information of XP_020622503.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3016:11426...34759
NR annotation: XP_020622503.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16109P-selectin OS=Homo sapiens OX=9606 GN=SELP PE=1 SV=4
Q4LDE5Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF02494HYRHYR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR003410DomainHYR domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR050350FamilyComplement & Cell Adhesion RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19325COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP