Gene detail

Detailed information of XP_020623334.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3144:173171...200064
NR annotation: XP_020623334.1, pyridoxal kinase-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020767675.1

CGCCATATAAGTGAGTACCCCCTAGGGGGGAGGAGGTATAACGAGGCCTATGAAGAAGGCAAAAGAAGACTAAGGAAATGCAATGTGGGATTCTTTGGGTTCAGAGAAGGAGGCGGAGctggactttttaaagttttcgTGGGTATGGTAGAGATCTGCCCATAGAGGGTCTGGGGCGAGATTAACTGATAGCTGATGGTCAAATGTCAGCCGAGATTGACGTGTTTTGCTGATCACTAAGCTGTGAAACACCGCCCAAAATTTAGGACATTTAGGTATTCATGAGTCACGACTGCTGAGATTCCATCATTCCAGCGCTCCATACTAGAAAGCATAACGATATGAAACGCAAGACGAGTCTGAAGATCTTCTTAAAAGTCTAAAAAATAGAACGGAGCCGTAGCCCGACAAGTGACATTCCCACTCCGTCCTGCTGCGGTCATGgtaattttctcatttgagagGTTACCAAGCTTTACGTTCTTCGAACGGTTGTCTAGATCTTGGCGAACTTTTCGAGATCAAATGGAAGAGAAAGCATCCTGTAGAGTGTTATCTATTCAAAGTCACGTTGTATCAGGATATGTAGGAAACGACTCGGCGACATTTCCACTTCAGgttcttGGTTTTGATGTTGACACGATCAATTCGGTTCAACTCTCTAACCATACTGGATATGAACATGTTCAAGGTCAAGTTTTGGATGCTAAGGAACTCAAAGTCTTGTTTGAAGGACTCAGGCTGAACAATTTACACCATTTCTCTCACCTTCTGACAGGTTATGTAGGTTCTAAATCATTTTTAGAGGAGGTACTGCAAGTTGTACATCAGCTAAGAAACGCCAATCCCAACTTAGTGTTTGtttgtgaTCCTGTCATGGGAGATGCAGGCAAATTTTATGTTCCTGAAGAGTTAATGCCAGTGTACAGAGATCAGTTGCTTCCAATGGCTGATATTATAACACCAAATCAATTTGAAGCAGAGCTTTTAAGTGGTGTGAAGATAACCAATGAAAGTGAAGCTTTTAAGGCAATGAAAATACTACATGAAAGGGGCACAAAGACAGTGGTAATAACCAGCTCAGAGCTGGGTGACAGCAAAACACTCATAGCCCTTGGCAGCTCACTGAATGgACTAGCTGGCGAGGGAAACAGACCGACACCTGGACAAATTGAACTACGTCTGGTTCAGAATCTTGATGATATTAGGAATCCAAACATAACATTCAAAGCTCAAGTAGTTTCAGATTGATCAAGGGTTGAATGTAGGGACAGGTATCTGTAGGATGTAGTTTTGCTCAGAAATTTAATGAATGATCAGTTTTAAATCAAGAGAATTTATTAGTAAGACcaaaaatgtgatttttttatttagtgtGGTTAGCTAAGAGAATTCAGTCAGATTGTATAGTGTTTGGTCAGGGAATAAGTTTTTCGTTTACATGTAAGCTGTGCTGTTTCGGTCGGTAGGTAGAAGCACTTGGGAGTTTACaaggaaaatgaattttttttaagcccGGGGCAAACGTTCTCACAGCAAATATATCCGGCATTCTCCTGCCGTGGTAACTTTGTTGGGCCTTTTTGCACAATGTTTTGTTGGAAACTTGATTTGAATCAAACTTTCATCTAACATGTCCTAGCAGGGTAATGAAATAGTTGCGATAATTGGGACCTTTTCTCACGGCTTTAGATTAAAGATCAGCTGATGGTCTGAACAGCGGCTTGAAGGTATGCATTTCCTCCATCTTTTGGATAGTATAGAGAAGACAAATCGATAGCGAACAAAAATGCTTCTCGCTCGCTCACGTTCGATCGCCAACTGGCCATCTTCGCGCTCGTTCTGGATGATTCCTCAAGAGTGAACGTTTGAAATGTAAACAGCAGCTCTGACGACTTAGCTATTTGTAATCGAACGACAGTTCAGCCTGAAAAGTTTTTACTACATGGAACTTGCTGGAGATTTCAAGATTCATCGTACACGAGTATTTCGTTGTACTTGCTCGTTGTTAGTGTACATATCAAAGAATAAACCATGCACctgaactgaagaaaaacaatacaaacaaatatttaagcTGCTGCATAGAAAAGCTAGCAAATATTTTGACGCCTCCACgtattattttagttattttcattacattttccCAGGTACATACTAACCTTTCGTTATAAGTTCTtcgatacaaaaaaaaagaaaaatgggagtAAGTGAAATAAGTGATTTGAGTGAGACTGTTTGAATTGCATGCTAGTATGACGTTTCTTTAATAACATCAATCTTAATTAGTATCTGTTATTCGGTGAAAAGTAAAGTACTCGCGAAAAATCTGTGTAATAAAACGTAATTTTGTAGTCTT

Protein

Uniprot

Uniprot term	Description
O00764	Pyridoxal kinase OS=Homo sapiens OX=9606 GN=PDXK PE=1 SV=1
O35331	Pyridoxal kinase OS=Rattus norvegicus OX=10116 GN=Pdxk PE=1 SV=1
Q8K183	Pyridoxal kinase OS=Mus musculus OX=10090 GN=Pdxk PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08543	Phos_pyr_kin	Phosphomethylpyrimidine kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029056	Homologous_superfamily	Ribokinase-like	Interproscan
IPR013749	Domain	Pyridoxamine kinase/Phosphomethylpyrimidine kinase	Interproscan
IPR004625	Family	Pyridoxine kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10534	PYRIDOXAL KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008478	Molecular Function	pyridoxal kinase activity	Interproscan
GO:0009443	Biological Process	pyridoxal 5'-phosphate salvage	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06990	MEMO1; MEMO1 family protein	-	Cytoskeleton proteins	ko04812	deepkoala