Gene detail

Detailed information of XP_020623627.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3154:2594275...2603751
NR annotation: XP_020623627.1, uncharacterized protein LOC110061133 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110061133

ATGTCGTGGCCAGTTCTGATTGCTCGTAGGAATTCGTCTGGTGTACCCGGGGCTTGGAGATGCACAGGTCGAAACAACGAGGAAATGGTCGACAAGCTTGTTCACATGGGAGTTATAACGGTCAAAGAAGTCGAGGACGCTTTTCGTGCGGTTCCTCGAGGGGCTTTCGTTTCCCCTGACCTACAACTGGAAGCCTACATCGATGCGCCATTGCTTGGAGATCCGCATCTTCATATGTCGGCCCCTCATATGTACGCTACTGTCCTGGAGGCCTTAGATCTGTCGCCAGGTTTGTCATTCCTCAACATTGGTAGTGGAACTGGCTACTTTTCCTGTTTGGCTGGTTGTATTTTGCAAGCTCAGGGTATCAATCATGGCATTGAACTACATGAAGATCTTGTGCACTTTGCTAAGGAAAGGGTCGAGGAATTCCTAAGGTTCTCTCCTTCGGTGGCTTACGACATGTGTCCACCCAAGTTTATAGCTGGAAATTGTTTTCGATTGGACCCAACAGGATGTAGCTATGACAGGGTTTACTGTGGAGCTGCCTGTCCAGCAAGTAAAGCTCCTTTCATTTTAAGTTTAACCAAAATTGGAGGATTTGCCATCATTCCTTGTAGAGACAGGCTGCTGAAAATTGAACGAGTGTCTGATTCAGGAGTGAAACAGACTTGTATCAGTGAGGTGTCTTTTGCATCACTAGTGGCAATGCCTGAAAGTGATTCAAGTCTTCCCAAGCTTTCATTTCCAAAGGAAAATCCAAGAAAGAAAGAAAAGTCTCTACGAGTTTACCCTCCATCCAGTATACTGGTTAGCCGTGGACAGGCCAGATCACTGTTAGCAAGACTGCGAGCACTCCAAGAAGCTAGTGAATGTTTGCATATGTCTTTGCGTCTACCTGTCGCATTCTGTTATGTCCCATGTCAACAACAGATCCAGCAGTACCTCAGTAAGAATTCAAAAACAAAGAAAGAATCAAGAACCATTGTGACTTCACCTGTGGACAGAAAGATCTCTTTCTTTGGCCTGCAAGGTACATGCGGAGAAATGAGTTCTTCTTGCACAGATCAGACAGGCTCAGAGAGTCTTTGGAGCCATCTACAGCAAGACAAGCTATGGCAAACTGTGCTGGAGTATTACTACAGCCTCTGTAATGTCTCCATTGAGAAGAGAAGTCAAGCATTGAATGTCTACATCAAGAGACGAGTCAAGCAGAAAAGTGAAAGAAGAGAAAGTAAGAAAAGCTTGTCTTATGCTGAGATTGCTCATAAGCTTGGCATACTCGCTGTGAACATGGCACCTCCTCCGATCTCAAAACAAAAATTGGAGGACACAGTGGAAAACAGAACTGAGTTAGAAGGAATATCATGTACAGCAACTACTTCTTCTCCAAGTGGCTTCTGTGGTGCACTTCGTGTAGATGGCAGTATCACTGAACAGCACGGCACTAATGGCTGTTCAGCCAAATTGCCATGCAGCACTCTTGCTAATGATTCAATTGTTGCAAGTGATAGCAATTCTCAGCAAACAAGGTTATGCGACACTACAAAACATCCAAGTACATTAAGTGACAGTCAACCACCCAACAAATTGTCTTGGAAGTCTTCTTCAGATAAAGATTCTTCTTGTCAACTAAGCTTACATAATGAATGTAGAACTTCAAGCACATCTTCTGGATCACACAGCCCACGATATACTAATGTACTTATTGACTTAGAGAAAGTGCACATGGAAAGGTTATCCAGTGTACCTTCAAATGGCTGGGACATAAACAATGATCTTGTTCTTGTGCGCTTTTTATGCGAAGTTCATGAAAAGTCTAATCCAGGACGATGTAAGGGCTGGTTCAAGGCTGAAAGTGTCATACCTGAGCTGTTTTCCAAGGCTGGTATCATGAGCCATCCATGTCTTGCTGGCCTCTCTTCAGAGCAGTTAGCTTACCGGGCTATTGCTCTGTGTAGAATTGCTCAGATTCTTGACTCAGTGCTTTATCTCGTGAGCGGCCCCTCTATGTTGAGAGACCAGACCTTTTGTCCAAATAAATTCCTGCTTGATTCCTTTTCGGAGTCCTCCTTCATGTCATCATGGCTATTCTCCGAGTCCAGAGGAAGCCCAACTCCAGTTTTAAAGAGAAAAGAAGGTTTGTCAAAGCGTGACGTGGAGGGGAAAGCTGATGATTCACCCAAAGAGGAGACTAATCACCAACAGGAGGTGATTGTCAAAAAGACAACAGCCTCACGAGTATCCCCTGAAAGGTACAAGGAGCAACTCAGGAAGGTGAAGAACAAGATACATTTTATAGAAGAACAAAAGCAACTAGTTCACAGCATTCGAGAGCAGGAGATACCTCCACAGGAACTAACTCTTGACATAGACATTGTTGATGCCAAGCTGCAGCGGAATGAACTGATGCTTAAACAACAGAAACAAGAACATTACAAGAACAACCTGCAAGCACTGTTGAAGAAACTCAAGGAAGAAGAGAAGCTGCTAGCCAAGAAGGCGGAGTCTTCACTAGAGGCCTCAAGGCAGGAGACAATTGAAGTTCAACAGTCCAGTTCCTCGGCGCAGCCGGCTACTAAAATTACAGACCAGTCAGCTGGGTCATCTCGAAAATGGAGTGTCAGCTCTTCTAGTAAGCAGGAAAATGACAGCAGTAACTCTGTGCGTTACGACTTATCATCGCTACTGCCAAAAATGCGTTTTCTGTTGCCGCTCTGCAATCAGCGGTGGCGCTTGGTTCAAGAGCTGTTGCAGACCACTGAACTGTCAGCTCCTGATTACATGCCGGTTATAACGGTGGATAGGCGAGTACCGCTGATCGAGCGCCATGCTGACTCGCGGAACAGTGTTTTCTTACAAGTTTACCATGAGCTGAGAGGGGAGAAGCTTCATTTTCGCTGGAACAAGAGGAAGTATGACCAATGGTGGGAAGTGAAGTTTGTAGGTGAAGGCATTATTGATCAGGGTGGAGGTTTTCGTGACTCTTTGGCTGAACTTGCTGACGAGCTGTGCCCTCCTGAAGAACGCATACCAGAGATCCTGCCATATCTGATCAGAACTCCTAATCACAAGGAGAAGACTGGTGATTTTCTGGACTGTTTCATTCCCAATCCCTCTTGTGACGCTTTGCACATGTTCCACTGGCTAGGGGTCCTCATGGGAGGAGCATATCGCAGTGATGAGAGCCTCACTGTGGCCTTCCCTCCTTTTGTTTGGAAGCTCATTGTTGGAGAGCATGTCACGTGGGCCAAGGACTACATCGCCATTGATGAAGCAGCTGTTAACATAACAGGTGAGAGTAACACGTAA

Transcript

rna-XM_020767968.1

GGTAAACAGTCGCTGTACCCTTATTATACGGTAATGGGGTAAACGTGTTGTCAGGTGCTTATTCGTCTCCTCGTTTTTGAAGATAATCCGAAAACGAAAGCGGTGACGAAGCAAATTTGGAAAGCGCCGTGAAAAAAGCTGAAGAATGTCGTGGCCAGTTCTGATTGCTCGTAGGAATTCGTCTGGTGTACCCGGGGCTTGGAGATGCACAGGTCGAAACAACGAGGAAATGGTCGACAAGCTTGTTCACATGGGAGTTATAACGGTCAAAGAAGTCGAGGACGCTTTTCGTGCGGTTCCTCGAGGGGCTTTCGTTTCCCCTGACCTACAACTGGAAGCCTACATCGATGCGCCATTGCTTGGAGATCCGCATCTTCATATGTCGGCCCCTCATATGTACGCTACTGTCCTGGAGGCCTTAGATCTGTCGCCAGGTTTGTCATTCCTCAACATTGGTAGTGGAACTGGCTACTTTTCCTGTTTGGCTGGTTGTATTTTGCAAGCTCAGGGTATCAATCATGGCATTGAACTACATGAAGATCTTGTGCACTTTGCTAAGGAAAGGGTCGAGGAATTCCTAAGGTTCTCTCCTTCGGTGGCTTACGACATGTGTCCACCCAAGTTTATagctggaaattgttttcgatTGGACCCAACAGGATGTAGCTATGACAGGGTTTACTGTGGAGCTGCCTGTCCAGCAAGTAAAGCTCCTTTCATTTTAAGTTTAACCAAAATTGGAGGATTTGCCATCATTCCTTGTAGAGACAGGCTGCTGAAAATTGAACGAGTGTCTGATTCAGGAGTGAAACAGACTTGTATCAGTGAGGTGTCTTTTGCATCACTAGTGGCAATGCCTGAAAGTGATTCAAGTCTTCCCAAGCTTTCATTTCCAAAGGAAAAtccaagaaagaaagaaaagTCTCTACGAGTTTACCCTCCATCCAGTATACTGGTTAGCCGTGGACAGGCCAGATCACTGTTAGCAAGACTGCGAGCACTCCAAGAAGCTAGTGAATGTTTGCATATGTCTTTGCGTCTACCTGTCGCATTCTGTTATGTCCCATGTCAACAACAGATCCAGCAGTACCTCAGTAAgaattcaaaaacaaagaaagaatcAAGAACCATTGTGACTTCACCTGTGGACAGAAAGATCTCTTTCTTTGGCCTGCAAGGTACATGCGGAGAAATGAGTTCTTCTTGCACAGATCAGACAGGCTCAGAGAGTCTTTGGAGCCATCTACAGCAAGACAAGCTATGGCAAACTGTGCTGGAGTATTACTACAGCCTCTGTAATGTCTCCATTGAGAAGAGAAGTCAAGCATTGAATGTCTACATCAAGAGACGAGTCAAGCAGAAAAGTGAAAGAAGAGAAAGTAAGAAAAGCTTGTCTTATGCTGAGATTGCTCATAAGCTTGGCATACTCGCTGTGAACATGGCACCTCCTCCGatctcaaaacaaaaattggagGACACAGTGGAAAACAGAACTGAGTTAGAAGGAATATCATGTACAGCAACTACTTCTTCTCCAAGTGGCTTCTGTGGTGCACTTCGTGTAGATGGCAGTATCACTGAACAGCACGGCACTAATGGCTGTTCAGCCAAATTGCCATGCAGCACTCTTGCTAATGATTCAATTGTTGCAAGTGATAGCAATTCTCAGCAAACAAGGTTATGCGACACTACAAAACATCCAAGTACATTAAGTGACAGTCAACCACCCAACAAATTGTCTTGGAAGTCTTCTTCAGATAAAGATTCTTCTTGTCAACTAAGCTTACATAATGAATGTAGAACTTCAAGCACATCTTCTGGATCACACAGCCCACGATATACTAATGTACTTATTGACTTAGAGAAAGTGCACATGGAAAGGTTATCCAGTGTACCTTCAAATGGCTGGGACATAAACAATGATCTTGTTCTTGTGCGCTTTTTATGCGAAGTTCATGAAAAGTCTAATCCAGGACGATGTAAGGGCTGGTTCAAGGCTGAAAGTGTCATACCTGAGCTGTTTTCCAAGGCTGGTATCATGAGCCATCCATGTCTTGCTGGCCTCTCTTCAGAGCAGTTAGCTTACCGGGCTATTGCTCTGTGTAGAATTGCTCAGATTCTTGACTCAGTGCTTTATCTCGTGAGCGGCCCCTCTATGTTGAGAGACCAGACCTTTTGTCCAAATAAATTCCTGCTTGATTCCTTTTCGGAGTCCTCCTTCATGTCATCATGGCTATTCTCCGAGTCCAGAGGAAGCCCAACTCCAGttttaaagagaaaagaagGTTTGTCAAAGCGTGACGTGGAGGGGAAAGCTGATGATTCACCCAAAGAGGAGACTAATCACCAACAGGAGGTGATTGTCAAAAAGACAACAGCCTCACGAGTATCCCCTGAAAGGTACAAGGAGCAACTCAGGAAGGTGAAGAACAAGATACATTTTATAGAAGAACAAAAGCAACTAGTTCACAGCATTCGAGAGCAGGAGATACCTCCACAGGAACTAACTCTTGACATAGACATTGTTGATGCCAAGCTGCAGCGGAATGAACTGATGcttaaacaacagaaacaagaaCATTACAAGAACAACCTGCAAGCACTGTTGAAGAAACTCAAGGAAGAAGAGAAGCTGCTAGCCAAGAAGGCGGAGTCTTCACTAGAGGCCTCAAGGCAGGAGACAATTGAAGTTCAACAGTCCAGTTCCTCGGCGCAGCCGGCTACTAAAATTACAGACCAGTCAGCTGGGTCATCTCGAAAATGGAGTGTCAGCTCTTCTAGTAAGCAGGAAAATGACAGCAGTAACTCTGTGCGTTACGACTTATCATCGCTACTGCCAAAAATGCGTTTTCTGTTGCCGCTCTGCAATCAGCGGTGGCGCTTGGTTCAAGAGCTGTTGCAGACCACTGAACTGTCAGCTCCTGATTACATGCCGGTTATAACGGTGGATAGGCGAGTACCGCTGATCGAGCGCCATGCTGACTCGCGGAACAGTGTTTTCTTACAAGTTTACCATGAGCTGAGAGGGGAGAAGCTTCATTTTCGCTGGAACAAGAGGAAGTATGACCAATGGTGGGAAGTGAAGTTTGTAGGTGAAGGCATTATTGATCAGGGTGGAGGTTTTCGTGACTCTTTGGCTGAACTTGCTGACGAGCTGTGCCCTCCTGAAGAACGCATACCAGAGATCCTGCCATATCTGATCAGAACTCCTAATCACAAGGAGAAGACTGGTGATTTTCTGGACTGTTTCATTCCCAATCCCTCTTGTGACGCTTTGCACATGTTCCACTGGCTAGGGGTCCTCATGGGAGGAGCATATCGCAGTGATGAGAGCCTCACTGTGGCCTTCCCTCCTTTTGTTTGGAAGCTCATTGTTGGAGAGCATGTCACGTGGGCCAAGGACTACATCGCCATTGATGAAGCAGCTGTTAACATAACAGGTGAGAGTAACACGTAATCTCTGCAGACATGTTGACACTGTTGCCCGTTGCGAGGAATAATTTGTCCTGCAACTTGCGCGCTACACGCGCGATTTTTTTCATGGAACTTCGTCGCGCGTGGGTGCTGTCGCTGCTCGAGGTGGGCAGTTGAGGGAAC

Protein

Uniprot

Gene family

Uniprot term	Description
Q8BHD8	Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcmtd2 PE=2 SV=1
Q58CZ2	Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 OS=Bos taurus OX=9913 GN=PCMTD2 PE=2 SV=1
Q9NV79	Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PCMTD2 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan
PF01135	PCMT	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR042469	Family	E3 ubiquitin-protein ligase HECTD3	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46654	E3 UBIQUITIN-PROTEIN LIGASE HECTD3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan