Gene detail

Detailed information of XP_020623779.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3164:853397...856116
NR annotation: XP_020623779.1, protein phosphatase 1 regulatory subunit 3B-B-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020768120.1

cccccccgggggatTTGACTTTCTACTGACCTCTCCAAGGATAGAAATATTTTAGTGGGATGGAGGTGCGAAGTACGATCTTCACCAGTTCTTGATggtagggggtgggggaggaggacGGGTGGATAATTATTTCGTCGCCGTTCCCGACGGAGCAGCTAACCAGCTAAATGGCTTATTTGTACTTCTGGCAAGCGACTGAAAGTGAAATACGGCTTACAAATTATGTTTTTTCTGCAAAGTAGCTTTTAGGTAGCGTAATTTCGGTATTTTTATGTCTTCTGCTTCAGTCCTTTGGCGTGTCGAGAATTTACTGAGCATCACCTGAGTCGGGATTATGTTGTATTGACTTTGCCCTCTCTGCTGACTCCGTTATCCCAGAATTCATCATTCAAACTGTTGTCGTCGCGGGTGGCCTGAAATGATTAAACCCAGGCTACGTGTCGAGAACGCGAATACTACTGTGCACGTGCTGAGCCCCTGAAGTGATATTGAACTTTTGAACTTTCGACGGAATCCCAGGAAAAGGAACTCTATTTTACATACATCACACATCCTGCTCGGAAAAATCAACTTCAAGACGTCAGAAAGTACCAAAAATGCGCAAAAAGGTCACGAATAAATATCCTGATacaaatttttaattcattcgATAAAACCTTTCTTCAAACAGGGCAATAAAATGTTCGCAGTTGTGCAAGAACAGCTCATATGAGAAACGTCACCGTGACTAAAATTTCTTCAGATATCCGAAACTCGTGGTTCCTTCATGTCTGAAGCTAACGATGAGCACAAGGTTTTCTCCGTGTAATGCAACGCGTAGGGTAAGAAGTTTTGAGAAAGTTTTGAAGGTCAGACGaggttatttcattttttcatcatttttattttcttttgagcGCGTGATTTCGTGACAACACCGTGGAAAGTTTTAGAAAGACAGGAAATATCATTAGAATCTTATGATACTTGTAAAATCTTTAAACCAAAATATAGAACATACCGCGCGGTCCGAATCACTGAAACGCAATGAAAAGCGCTACTTCGTAGAGTAACGTACATCTGCGCGTGACTTCGTGACAACGTCAGGAACAGGAAAAATCATtcgaatttcattttgatgatACTTGTATGATCTTCTAACCACAAAAATAGGAAATACTTTGCGCGTTGAAAAGCGTAGGTttgttaaaagacaaaaatagggTAAATTCCTGAAAGCGTCTAAAGCCTTGTTGAAAGCGTGTCTAATTTTCACTCTAGTGAATCGTAGCACGCGGAGAGATTTCCACATACAATGCAGTCGTCCGTTGATTTCACGTGATCCTGTCGATCGGAAgggcgcgctgattggttagtttctttgttatttgaCAAGCTTCACGTGAAGAGATTACAAGTCTACTTATATAACAATAACGAAAAGATTTCTGTGCAAATTTGTAGTGGACACGAAGCGAGAAGGGGTAAAGGAGTTGGTTAGAAAGCATTCCAAAATTCTGCTGGTTTTCGCTGGAGGAAGCCTGAAAGGTGTAGGAACTGTCTTTTAAATTTCTCACAAGAAATCGCATTTCCACGCACAGCTGAGAAGTCACACAAGGAATTATGCCTCCAACACCGTCTTTAAAGTCTTGTGTGGTCAAATTCAATTCCTGCAGGAAGAGTGACTCGGACCTCcacaagaaagacaaaaaggtTCATTTTGCAGATTCGATGGGACTTTCTCTCGTTTCTGTAGTTTATTTACCGCAACCTGCGCCAACGGCGAGATTTTTGTCGAAGCGAAAGTGGTCTTTTTGCGAGGAGAGAGCgaggcttttaaattttacaccgCCGGTTGAAAGAAGAGACTTCCATGAAAGACTAAACGGGCTAAATGTGTCTTTAGAAAACATTATTTTGCGGGACTTTGGTATGTTCGGAACGGTAAAAGTTCGAAATTTAGCTTTCGAGAAGAGAATAACCATACGGTACACAACGGACGGCTGGTCAACTTATCGCGATGTCGTTGGTCAATACGTTAATGGTTCTCACGCCGGATTCACGGACACCTTCTCATTCGAGATCGCGTTGCCGTCAACTCTCATTAAAGACTGCAAACTGGAGTTTGCTGTGTGCTACAAGGTTCATGGAATCGAATTTTGGGACAATAACAGTGGAGATAATTATCGGGTTATGTGCTACTCGTCAAACCAATGGAAATCGCGAGAATGGGTTTACAATAATAGGAACAGTTTGAACGGTTACGCATATTTGCAAAACAGATATGTTGGTCTTAGATTCTAGTGCTGTAACATAAACGGCAGGTATTAAATATAGAACTCCTCTTTTGTACGAGGGCttcgaaattaaaatcgaacattcagttttaatttattggAATTATGAAGGATGGTTTACCTGTTGTCAACTTCTGTAGCCATAGACTAAAGGCAAATTTCATAGAGAACTAAATTATTTCAGTGCTGATGTATTTGTGTGATAACTGACCGACTTTATATGTTGGGTGTTTAAGAACATAAGCGGTGTAAGTCGTCTTATCGTTATTTCTCATTTGGGTTGACTTTTATACAGACATAACTCGTACTTGTAACTACGTGTTTCGTTTCTAACGAAAGAAGAATTTCTCTAGAGTGAAAAAGCGTTATCGAGTTGGCAAGTTTGttggaattttttcattttgtggtGAAACGaagacaataaaattatttttttgtata

Protein

Uniprot

Uniprot term	Description
Q6GQ68	Protein phosphatase 1 regulatory subunit 3B-B OS=Xenopus laevis OX=8355 GN=ppp1r3b-b PE=2 SV=1
Q28E28	Protein phosphatase 1 regulatory subunit 3B OS=Xenopus tropicalis OX=8364 GN=ppp1r3b PE=2 SV=1
Q86XI6	Protein phosphatase 1 regulatory subunit 3B OS=Homo sapiens OX=9606 GN=PPP1R3B PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005036	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan
IPR050782	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan
IPR038175	Homologous_superfamily	CBM21 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069	Molecular Function	glycogen binding	Interproscan