Gene detail

Detailed information of XP_020623846.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3164:1951846...1961501
NR annotation: XP_020623846.1, uncharacterized protein LOC110061341 isoform X4 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020768187.1

cctcaccgccaagctgaattttaatatatcgaaaacagtctattggAAAAATGGTGCACCGCAAAGTGTGTCATGGATAGAATGGATACTCGAGCGCCCTGATTACAGCTTAAAGAATGCTGATCTTTCAGAGTATGACTAACAATCGTGCGTTGTTTCACGCGAATGTAAATGTATAACGCAAGTCATATTCTAGGGCTGCAGTCATGTATTCTACCGTCATAAACACCTTGAGAGGACTTAGAAAACACTCGCTTCTATACGTAGTTCTCGTGGTTGCATCATCAACTGTGTTTCATGGCAGTAAAACATATGGCCCTGACTTCTTcatcactaaaaaaaaaaacaagctgaGACTATTGAACTATTGAAGCTGAGACTATTAAACTCTTGTTTCGCACTACTCCTTTTGAAATGCACCGCAGTGCCAGTCTGATAAAACAGGAAGTATAAAACAGGAAGTATAGATATCGCACAAATCTGATAACACCATAAGTAAAAAAGTACCGTTATATTGAGCAACGAGCAGCGCGGCGAACGTGATCTGATACATGCTAAACAGCGTGCATTGCCACATAAAAGACACGGCATCGTATTTTGGGTGTCACTTTCGGCAATCAGCTGAACGGTGCAAGGCAAAGATTGAAGGCGTTGCCTGCTATAGGCAagaaaatgcaatattttttaaCCCTAGTGTTCAGCTTCAGTATAGCTCTGAGCTTTTGCCCTGTTAACTCTTTCCTTATTCCACATGAAGGCAACGACAAGTGCCAAGAGTACACAACCTATGAGGATTGTGTGAAGGAAGCGTACATGGCGGCCGCAAAATGTCGAGTTTCAAGACTCCCATTACTCACGTTCAACATTTACGAGATCTTTACTGTCGCAATGGAGGCAAGTGTACAGGACCCAACGCTTCCTGGTGCGCATGTCCGCCAGGTTATGCGGGAGCTTTCTGTCATAAAAGTAAATATGCAAGAAAGCCATGTAAAAACGGAGGCTCGTGCATCAGTGAAAACCTCTGTAAATGTCCACCTCCATATTCTGGAGCTCAGTGTACAAGAAAAAGACTGGGAACCAAAGAGAGCCCGGCACCAAACGCACAGGCAATTCTTGACGCCGGCGACAGTGTAGGCAACGGCATGTACTGGATCCAGCCCCATGGTGAAACGGCCCCGGCTCAAACTTACTGCGACATGAGCTTTGCTGGTGGAGCGTGGATGCTCGCTAGTTATGGTTACGTTCACACAACGGGAACAAACTCCAACAACAAAGCCATTCCTAATATGAATAGTCTCTTTGATTTCGCCTGGCTTCCCAGCCAACGCACCTCCTCTCATGGCGTGATTAGTTTACCACACGGGGCGGTAATGATGGCAAATAACGCTGGTTACATGATCATGGCTGCGGGTAATAACCCAGCCACGGGTGGTATCAACCAATATGCATACGTGTACCGTATTTACCTAAAGAACAACCCttacaaaataacatttgcaAATCATAACCGTTACAATGGCGGACAGCCGGGCCGTATGCATATTGTTGATTTTGTCGTTGAAGCGTTGAAAGGAGAAAGTGGCACGTATGTGAGAAATGCCCTGGGGGAAGCACTGGGGGTGACATGGACCGACTCATATCACACCGATTACGGTTTTAAAGATAAGACCACGCCTTCTGCAACCTTTACCACGGGTCCCTTTTTTCCTAGTGTCCATTCGGGTTCGGGACGAAGCCCATATTCTGGATGTACCCCTACTAATTACGACCCTGATGTAGTGGGAGGGTCTCCTCATTACACACACCACGGATGGTTTACTGCTAACGGCTGGGACAAAACTGGCCAAACCTCTATCTGGTTTAAGTAAGGGGTTATTCCTAGTTATTGTTCAAACATCGGTTTAAGCTTTAGTAAGTTGATGAACTTCACTGACTACCTAGGTGGACCGGCTGCAGGGTGAAAGGGGCGGGGATGCTCAttgaaaatcttaaaagaaACCAATCTAGACGGGGCTCAAGCTTAATGAGAACTCTAAAATAccattttaaggtaattcccctgaaataaaactgcacataga

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07974	EGF_2	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR013111	Domain	EGF-like domain, extracellular	Interproscan
IPR050969	Family	Developmental Signaling Modulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14949	EGF-LIKE-DOMAIN, MULTIPLE 7, 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan