Gene detail

Detailed information of XP_020624322.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3201:302626...314414
NR annotation: XP_020624322.1, adhesion G protein-coupled receptor L3-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110061807

ATGAATTTTGGTTCTATTTACATGATTTTTCTCCAGTGCGCTTTTTCATCTGCTGCCAAAGACTTGTACAACAAAACTTTTTGTGTTGGTAAATCGTCTGGTTTGCACGCTGACCCAGAAGATTGCAGAGCTTATTATGATTGCAATAACGACAAAACACGCCATCGTACAGGGTTATCGACCGGACTTATGTTTGACCCAAAAAAGAAGACATTCGTTCATTCCTGGAAAATGAACTGTGCAGTAAAAAAAGTGTACCGTGAACTTTGGACAAATGTACCAGGGTCCTCAGTGACTGATTTGGAATCCAGCAGTTTGTATCCCTGTGCTCCTTCGAAGACGAAGTTCATTGACACGTTTTGTGTTTACAATCCAGACAGCGGCGATTATTATGGTCAGCGGTTAAGATCTTTCTTCCGAGCTCCTGAGACAGGCAATTATACCTTCCAGACTTCCTGTGATAACGCCTGCCAGCTATGGATGAGCAACAGTGAACTTCCCACCGGGAAACGTCTAATCGTTGATCAGCGCAAATATAACACACGACATCTCTGGGATAAGTCTGATGATCAATCTTCAGAAAAGATATACCTTGAAGAGGACAACGTGTACTACATGGAAGTATTACACAAGGAGGATATACTGTATGATTTTATGTGTGTCGGAGCGAAATTTCCTACAAAAAAGAAACAGCAGCCCATTTCATCAAAGCATTTTGTCATGGAAGGAACAGAACTGGACCTTATCGGTTGCAGAGGAAGTGAGCAAGGATTACAAGATGTTAAATGTCAAGCAGAACGTTGTAAAACTCCAGACGAAATGCTCAAAACCTTCAAGCAGTCTATGGATACGATGACGAAAAGTTTGAAATCAATACCTTCAGACCAATCCCCTGCTTCGCTCCAGCAAATTACGCAAGTCACAAAGGAAAGCACGAAGACCATAAACGATGTACTAGTAGAAAAAACAAAAGAGCAATGGCGTCGGTCTAATACGAGTTTAGCTATGGAGATTGCAGAGATCACGGAGTCGTTTGGTAAAGAGTTGGCTGACAAATGGTCCAATGAAACATCTGCAGTCGGTTCATCGGAGGACAACATTTTTCTGCAGGCATCAGTGTTGTCTGGCGACTACAGATTTCCAGTGTCTAACATGGACAAAAATTGGAAAGAAATCAACGATTTCCTCACTTTAAAAGTCGCGGAAATCAAGCTTAAAGATAAAACCAAGGCTTTTAGTGTCATTTACAAGAGTTTGCATGAAATGCTACCATCGTCTCCATCCAAGGTTGGAAAAGAAAAAGGCAACGAAACGAATTACGAGCTTAACAGTCGCATCATTGGAAGTCTTGTGACGCCGTCAGCTACTGGTAAAAACCTGGATGTCCGTGTTACTCTCCAGCACTTAAAGTTCAAATCAAATGCCACTCAGGTACCAATGTGCGTGTGGTGGGACTTCACTGCTGGGGGCGTAAACAGCACTGGCCTATGGTCGACCAAAGGGTGTGACGTGGATACTGCTGCTTCAAATGAAACCCACTCAGTCTGCAAATGTGACCACCTCACTAACTTTGCAGTGCTGATGCAGATCAAATCGGACTCAGACCTGGAGGTTGATGAGTCCCATGCTGTAGCATTAGAGATCATCACTTACGTGGGCTGTGGATTGTCGTTGATTGGCGTTACCCTTACAGTCGTCATCATCATATGTTTGTCCGGTGTGCGTTCAGAGAGGAACCTCATTCATGTAAACCTGTCGCTGTCTATCGGCATCTTTCAAATTATTTTCCTGGCAGGAATTGAAGCAACTAGTAATGAGGTTGCCTGCACGTTGGTAGCGGTGTTACTTCACTATTTCTTGTTGGTTTCATTTGCATGGATGTTAATTGAAGGCGTCCATCTCTATGTTATGGTCGTCACTGTTTTTGAAAACAGCAAAGAACAACTTCGTATATACGGATTATGCGCATACGGTTTGCCTGGAATTGTTGTTCTTATTGCTGCCAGTGTTGCCCATGATGGTTACGGTACAGACTCCCGGTATGAAGTCAAATTACTGTTTGAAGCCACATGGTTGGATATCACGTTGTTTTTAGACCAACTGGGGTTCATCAGTATTGACCAATATTTCAAACTTTTCCTAATAACGTTTTTTCTATTGAAAATTTAA

Transcript

rna-XM_020768663.1

ACAAGCCAATCACCGATGTTAACCTTAAGACCTTTGAGTACACATCTTTTAGTGGTGACAGACAAGTCATAATCATTGTATGTTGCATTGTGCTATGGTTATTCTGGAACACAGTCCACTCGAAGAAGGAAAGCTAACAGACATAACTtgtcagtgaaaaaaaaaaaaaatcgacgcTCTGCTATGAATTTTGGTTCTATTTACATGATTTTTCTCCAGTGCGCTTTTTCATCTGCTGCCAAAGActtgtacaacaaaaCTTTTTGTGTTGGTAAATCGTCTGGTTTGCACGCTGACCCAGAAGATTGCAGAGCTTATTATGATTGCAATAACGACAAAACACGCCATCGTACAGGGTTATCGACCGGACTTATGTTTGACCCAAAAAAGAAGACATTCGTTCATTCCTGGAAAATGAACTGTGCAGTAAAAAAAGtgtacCGTGAACTTTGGACAAATGTACCAGGGTCCTCAGTGACTGATTTGGAATCCAGCAGTTTGTATCCCTGTGCTCCTTCGAAGACGAAGTTCATTGACACGTTTTGTGTTTACAATCCAGACAGCGGCGATTATTATGGTCAGCGGTTAAGATCTTTCTTCCGAGCTCCTGAGACAGGCAATTATACCTTCCAGACTTCCTGTGATAACGCCTGCCAGCTATGGATGAGCAACAGTGAACTTCCCACCGGGAAACGTCTAATCGTTGATCAGCGCAAATATAACACACGACATCTCTGGGATAAGTCTGATGATCAATCTTCAGAAAAGATATACCTTGAAGAGGACAACGTGTACTACATGGAAGTATTACACAAGGAGGATATACTGTATGATTTTATGTGTGTCGGAGCGAAATTTcctacaaaaaagaaacagcagcCCATTTCATCAAAGCATTTTGTCATGGAAGGAACAGAACTGGACCTTATCGGTTGCAGAGGAAGTGAGCAAGGATTACAAGATGTTAAATGTCAAGCAGAACGTTGTAAAACTCCAGACGAAATGCTCAAAACCTTCAAGCAGTCTATGGATACGATGacgaaaagtttgaaatcaatACCTTCAGACCAATCCCCTGCTTCGCTCCAGCAAATTACGCAAGTCACAAAGGAAAGCACGAAGACCATAAACGATGTACTagtagaaaaaacaaaagagcaaTGGCGTCGGTCTAATACGAGTTTAGCTATGGAGATTGCAGAGATCACGGAGTCGTTTGGTAAAGAGTTGGCTGACAAATGGTCCAATGAAACATCTGCAGTCGGTTCATCGGAGGACAACATTTTTCTGCAGGCATCAGTGTTGTCTGGCGACTACAGATTTCCAGTGTCTAACATGGACAAAAATTGGAAAGAAATCAACGATTTCCTCACTTTAAAAGTCGCGGAAATCAAGCTTAAAGATAAAACCAAGGCTTTTAGTGTCATTTACAAGAGTTTGCATGAAATGCTACCATCGTCTCCATCCAAGGTTGGAAAAGAAAAAGGCAACGAAACGAATTACGAGCTTAACAGTCGCATCATTGGAAGTCTTGTGACGCCGTCAGCTACTGGTAAAAACCTGGATGTCCGTGTTACTCTCCAGCACTTAAAGttcaaatcAAATGCCACTCAGGTACCAATGTGCGTGTGGTGGGACTTCACTGCTGGGGGCGTAAACAGCACTGGCCTATGGTCGACCAAAGGGTGTGACGTGGATACTGCTGCTTCAAATGAAACCCACTCAGTCTGCAAATGTGACCACCTCACTAACTTTGCAGTGCTGATGCAGATCAAATCGGACTCAGACCTGGAGGTTGATGAGTCCCATGCTGTAGCATTAGAGATCATCACTTACGTGGGCTGTGGATTGTCGTTGATTGGCGTTACCCTTACAGTCGTCATCATCATATGTTTGTCCGGTGTGCGTTCAGAGAGGAACCTCATTCATGTAAACCTGTCGCTGTCTATCGGcatctttcaaattattttcctgGCAGGAATTGAAGCAACTAGTAATGAGGTTGCCTGCACGTTGGTAGCGGTGTTACTTCACTATTTCTTGTTGGTTTCATTTGCATGGATGTTAATTGAAGGCGTCCATCTCTATGTTATGGTCGTCACTGTTtttgaaaacagcaaagaacaaCTTCGTATATACGGATTATGCGCATACGGTTTGCCTGGAATTGTTGTTCTTATTGCTGCCAGTGTTGCCCATGATGGTTACGGTACAGACTCCCGGTATGAAGTCAAATTACTGTTTGAAGCCACATGGTTGGATATCACGTTGTTTTTAGACCAACTGGGGTTCATCAGTATTGaccaatatttcaaacttttcctaATAACGTTTTTTCTATTGAAAATTTAACTAGACTTCACCAACTACTAGCAGCATCCAATGTATACAGCCGGATTAGGCTGTCTTACTATTGATAACTACAAGGAAATCTGGCTCTCTTTCATTCTAAGTTGTAAAAGCTTGCTTTGCATGGTTTACAGCTATTTTGGATTCAGAAAAGGCACTTGTCAAATTGACGCCTTGGAAAATCAGTTTATAATAAGTACATTAAATTTAGGTTTATTTACGCATTTTACGTTTTCCCTTCAAGggaaacatgaaacatacacacacGCAATTCAGTTATATACACAAGAGACA

Protein

Uniprot

Uniprot term	Description
O95490	Adhesion G protein-coupled receptor L2 OS=Homo sapiens OX=9606 GN=ADGRL2 PE=1 SV=2
Q6QNK2	Adhesion G-protein coupled receptor D1 OS=Homo sapiens OX=9606 GN=ADGRD1 PE=1 SV=1
Q80TR1	Adhesion G protein-coupled receptor L1 OS=Mus musculus OX=10090 GN=Adgrl1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF16489	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002557	Domain	Chitin binding domain	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR032471	Domain	GAIN domain, N-terminal	Interproscan
IPR037524	Domain	PA14/GLEYA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan