Gene detail

Detailed information of XP_020624561.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3237:340417...343650
NR annotation: XP_020624561.1, alpha-(1,3)-fucosyltransferase 10-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020768902.1

CGAACGAACTTCCGGCAAATGGAGGTTAATGGCGGTCTTCCGTTTGTGGACTTTCTACAGAGTATTTTTGGGGTTATGTTTTGCGTTAGCGGTCCTTCAGTTATTTACAGAGTTTCTCTTTGGCTTCGAAAATGACGAAGCTCGCAATGAGGACAGTCTTGTGGCTGTCGACGATATTCAATGGACGGAAAACGACGAGAGAATCAAGAAAGGGGatgataaaatatttaatttcctGGAAGTGGACGAAAATTGGAAAGAACGGTATTCCGAAGAAATTTATTATGATGAAGTTGAACATGTCTTGAAGAATCTCCGAAAGCCTGCAGCATATGCTGCAAAGTACAAATTACCCATAATTCTTTGGTGGACTACATTTACCGGTGGAAATGACATCAAGAAGTGCAAACTTGGTGAATGCTATTTCACAGAGGCTCGCAAATTTCAGACCCATCCAAGGACTAAGGCTTTTATGTTCTATGGGACATCCTTTACAGCAAATGATTTGCCTCTTCCAAGACTTGGGCACCACGAGTGGGCATTGATCCATGAAGAATCACCCAAGAACAATCCCATTCTACATCATCAAACCACAATTGAACTCTTCAACCATACCGCTACATTCCGTAGGTCATCCGACTACCCTTTGGTCACTCAAATGCTTTCATCTTTAGCTGAATTACTGAAAAAGCCAAGATATGAAATCCATGAAAAGGGGACTAGTGGTCTTGCATCAGTAGTGTACGTGCAGAGTGGATGTAATCCACCCTCAGACAGAGATGAGTACATTGCTGAGTTAATGAAATATATAAAAGTTGACTCTTATGGGGCTTGCCTGCATAATAAAGATCTTCCTGAAGAATTCAAGAACCCTTTAACCATGGATGATAAAGGGTTCCATGATATCATTGCAAAATACAAGTTTACATTGTCTTTTGAGAATGCAATATGTGAAGATTACATAACGGAGAAGCTGTGGAGACCGCTTGTGTTGGGTTCTGTTCCCATTTACAAAGGATCGCCGACAGTTCAAGACTGGATGCCTAATAATCATTCTGTTATCCTTGTGGACGATTTTGAAAGCCCAAAGGTATTGGCTGATTTTATCAAAAAGCTGgatgaaaatgatgacgaaTATGCTAAGTACTTAGAATTTAAAGATAAAGGTGTTACTAATGAGAGGCTGTTAAAGTTTATGAAAAATCGCCCATGGGGAACTTCATTTGAGGAACAAAACTTCGTGACAGGATTTGAGTGTCTTGTTTGTGACAGAATTCATGAAAATTTGAAGCGCAAGGCATCAGGACTTGTAGAAAATGAGTATGTTGCTTCTCAAGAACATTATGGCTGTCCAAGGCCAGATAATTACAATTTTCCTCATTCAACCAATGTTGATATTGAAGGAGAAAGAGAATTTTGGTGGCAAGAGTATGATCAAAGTGTTATAGAATCAAAGAAACTTAATCAGCATGTCTATTCAAACTGGTACTTTTAACTCCTTTTATTAacatctttgaaaatttaatttaaatgtttgtaaattttagTCACATTTCATTAATATATGCAATGTTAAAAGAATTTTACATAAGGGCTAGTCAAAGGGGGTAGTGTTGACTTACCTTTataattttgcaaatattttgtatgaaagtaaaacaaaaaacaataaactatGATAAATATTGTACATTGCTATCAATACGAAAGTTAGCAAAAGCTAGGAAAGGGGGGATATTGTTggcatgtatgtacatgtaccatatGTTAAATTACTACCAAGGAATTGAACTTTGTAAAACATTTATTGgtaattctcttcatttgcATCCTTTTTTAAAGCCTTCCCAAGAAGTTTTGACCAAACCTTAGAAATGAGATGAGGTTCTAATTCAACCTCAAGTGTTTTAATTCATTGATAGTTCATGGGAGCGGAGAGATTCTTAACTgcttataattattatagaaaTGATTACCCTGACAATCTTggtattttaatattaattttaattatgtagatttagccaagcctaaaagttaAAGCAGAGCTCCCGGGCTTGggtgttcaaagcccaattaaactaacccagaatatgtgagaattttgatttgagttctgtaactttgtggtgaggttttctttttgtattgtttggtcttctgttttaagtttgaataatctTACATGTCACTAAACAGAAGCAGTgagaaacatttgtatacaagaaagaattatactttggttaatcctgggttagcattaatcAGCTTCTGTACAACCcagccctgattacaacaagttaacctgacatgagcctgcgatccgATCAAAAACCAGTACTTGACCAgcagaa

Protein

Uniprot

Uniprot term	Description
Q5F2L1	GDP-fucose protein O-fucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Fut10 PE=2 SV=1
Q8AWB5	GDP-fucose protein O-fucosyltransferase 3 OS=Gallus gallus OX=9031 GN=FUT10 PE=2 SV=2
Q5F2N3	GDP-fucose protein O-fucosyltransferase 3 OS=Danio rerio OX=7955 GN=fut10 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17039	Glyco_tran_10_N	Fucosyltransferase, N-terminal	Domain	Interproscan
PF00852	Glyco_transf_10	Glycosyltransferase family 10 (fucosyltransferase) C-term	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031481	Domain	Fucosyltransferase, N-terminal	Interproscan
IPR001503	Family	Glycosyl transferase family 10	Interproscan
IPR038577	Homologous_superfamily	GT10-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11929	ALPHA- 1,3 -FUCOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006486	Biological Process	protein glycosylation	Interproscan
GO:0008417	Molecular Function	fucosyltransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0036065	Biological Process	fucosylation	Interproscan
GO:0046920	Molecular Function	alpha-(1->3)-fucosyltransferase activity	Interproscan