Gene detail

Detailed information of XP_020624696.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3250:1074638...1089658
NR annotation: XP_020624696.1, uncharacterized protein LOC110062177 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110062177

ATGGTTGGACGAAAATCTGCCACCGACACTTTCATTCCTCACACGGACAAGCGCGCCCACATTGCACGTGTGCATGTGGTACCGGACGTGCCACCAGTGAACGGCCTCCTCAGACATTCCCGTATATTCCGTGTGTCAATGCCGTACGGTCACATAGAGAACCAACCTGGTCGAGAGGAGGGACTAATGTACATGCACATGTGTAACACCACGGAGGTTTTTAAGACGATACTGAAGAACATCGCTGGAAGTGACAAAGAGTCTAAGCTAGGTGAGGTAACCCCCGATACCTTGATCAGTGCTGTGCAACCTCTCCAGGGAACCTACTGGTATGTGCCCAGTGCTGAGGAATTGAAGTTACCCACCCTCAAGGAACGAAGGTTTGAAATCATAGATTTTTGGAATGTGAGAAGTCCTACAAACGACTACTTGTTTTACAATCAGAAGGAATATCTCCACCGTATGACAACTGGTGGTTATAGCCCAGGGGATCCGCCCAGTGACAGAGTACTCCGCCTGTTGGACTACGCCTTCCAACAGTGGAATGACCAATGGTTCAAACGGCGAGAGATGCCCAAATTTCCTCATCTCCTCGAATTCGTATCGGACGCAGAAACGAGCCGTTTACTACAGAATGCTTCCATCATGATCCGGAAGGGATGGGCAGTGAAAGTTTCCCTGGGAGGATTGTTCACCACAAATAAAACCGCCGAGCTGGAAAATCCAACCTTCTTTGGCAGAAAAGCTGACACATTCAACCTTCATCCTGATGAGCTCATTGTGGGAAGGATGCCGCCGTGCTTCTCCCTTGGGCTTGGAAAGGCCGTAATGCCTTACCTCCGGGAAAACGAAACGATGCCAGCTTTCTTCAAGGGACTGAGTGAAGCTGCAGGAATGGGACACGTGATACCAGATTTTGAAACGCTACTGCAGAAGGGTCTCGGCAAAATGATTGAAGAAATGAACGCCAACATGGGCGAAACCGAAAAGCAGAAAGAATTTGTCCGTTCCTGTATTCTCGCTTTGGAAGGAGTTCAGAAGTACATCAAGAACTTCGGTTACCTGGCAGAATACTTTGCTCACAACAGCGACTTTGCTTTATCTGAAGCCCAACGATCACACTTGAAGAAGATTAAAGATAGAATGAACAAGATCTCTACCGACCGACCAGAAACCTTCATTGAGGCTGTTCAACTGCTGTTCTCCTTCCACTGCTGCCTGCACCTGTCGGGGGAACCCACATCTATCGGACGACTTGATCAGCTCCTGGAACCTTTTTTCCAGGGACCCCCTACTGAGGAGGCCCAGGAGATTATCGACTGTCTCTTTGTCAAGCTGTGTGAACACGTGCATCTCAACTCACGGCTTTTGAATGATCTGGGTGCTTGGGGAATGACCGCTGTACCATATGCCAGCACGGGAATGTTTCCCAATGGCGATACTATCAACCAGTGGGTTCAGCAGATCACTGTGGGAGGTTACAAGGCCAACGATGCAGAGGTTCCACAAGATGCCTGCAACGCCATCACGAAAATGTGCTTAAAGGCCTCACGCAGGCTTCCCCTTAGTGCTCCATGTTTGTCCCTGCGAATGCATAAGAATATGCCGCAAGAGGTTCTTCAAGAGGCCGCTAAGGCTCTTCTCAGCGGAGGGGCCCATCCCGTCCTTCCTCACGACGACCACTTGATACAGGGCCTTGTTGAAGCGGGAACATCAGACGTGCCAGTGAGCCTAAAAACCGCGCGAAACTACGCCTGTGACGGTTGCTATGAACCAATCATTCCCGGCGAGACAGACTTCTCATTAGCTTACGTGCCTCTGTTGCAAGTGCTTGAGATGTCAATCAACCATGGGTCTACATATTCACTCGCTGGGCCTGGATTCTTGGAGGGGGTACCTCAGTCTCTGCCTACAGCTCATCCTGAGGAAATCGTCAGCTTTGAACAGCTCAAAGAGCTTTTTGCTCTTCATCTTCGTGTGCGGACAGAATATTCCATTTTCCTTCTACTCCTCAACTATGGCAACATCGTCGAGTTTTGTCCCAGTCCTCTGCTCTCTTCCCTCATTCGTGGCTGCCTGGAAACCAAACGGGATATTTACGACGGCGGCGCTAACTACACTTTGATTGGTATCCAGTTCATATCCTTCGCCAACACCGTCGACGCTCTGTACGCCATTAAGCGGCTTTGTTTTGATCATGACTCGGCTGTTATTTCCTTGGCCGAGCTTGTCCGCTGTCTCAAGTGTGACTGGGGATACAACATGCAAGAGCCCTTCCACGATGCGGTCGCGGGAACCACGCGTGGTCAGCGGCTGTCTGACACGTACAAGGAAGTACGTGAGAGGGCGCTGAGCCTACCGAAGTTTGGAACCAGCGCAGGTGCAGAAAACGAAGACGTTCAAAACATTACCAGTTGGTTAGCTGAGCAAGTTTCAACGGTCACCAAAAAAGTGGCCCGCGATGCTCCAGATGGACAACCGCTGAAAGGACTGATTGACGGCTTGAAGAAAAAGTATTCTGTTCCCGGAGCACCATGGGATGTAATGCTGCCTACAGGATCCGGGACATTTGAAGGATACGTTGGTTGGGGAGGAGGATGTGCGGCATCTGCTGATGGTCGACGCTCTGGGTCGCCGATTGCTTCAGACTTGAGCGCTGCTCCAACTTCATTGGATAAACCTGCCATACCGAAGAGCTTCGATATCTACAAGTCGCTTAAAAGCTGGAATATGAAGTCCATAAACGTTGGTTTTGCTAACGGTGCGGAGATTGATCTGAAAATTGACGAAACTTTCCAAGAAGACGACTTGGTAAAATTCCTGCAAAATTATGCTGAACAAAAGGAGGGCATTGGAGGAAATATCTTGACACTCACCTGCGCCAACCCAGACACCTTCGCTAAAGCTCAGCGGAATCCAGAGCAGTATGATCTCATCCGAGTACGCACAGGGGGCTGGAGCGAGTTTTACATTGCTTTCTTCACCGCCCATCAGAAACACCAGGAGAGGAGAATGTACTACCACACTACATGA

Transcript

rna-XM_020769037.1

TACAAACTTTTCGATTTAATTATTACAGATCCAAAAGGAAGACATGGTTGGACGAAAATCTGCCACCGACACTTTCATTCCTCACACGGACAAGCGCGCCCACATTGCACGTGTGCATGTGGTACCGGACGTGCCACCAGTGAACGGCCTCCTCAGACATTCCCGTATATTCCGTGTGTCAATGCCGTACGGTCACATAGAGAACCAACCTGGTCGAGAGGAGGGACtaatgtacatgcacatgtgtAACACCACGGAGGTTTTTAAGACGATACTGAAGAACATCGCTGGAAGTGACAAAGAGTCTAAGCTAGGTGAGGTAACCCCCGATACCTTGATCAGTGCTGTGCAACCTCTCCAGGGAACCTACTGGTATGTGCCCAGTGCTGAGGAATTGAAGTTACCCACCCTCAAGGAACGAAGgTTTGAAATCATAGATTTTTGGAATGTGAGAAGTCCTACAAACGACTACTTGTTTTACAATCAGAAGGAATATCTCCACCGTATGACAACTGGTGGTTATAGCCCAGGGGATCCGCCCAGTGACAGAGTACTCCGCCTGTTGGACTACGCCTTCCAACAGTGGAATGACCAATGGTTCAAACGGCGAGAGATGCCCAAATTTCCTCATCTCCTCGAATTCGTATCGGACGCAGAAACGAGCCGTTTACTACAGAATGCTTCCATCATGATCCGGAAGGGATGGGCAGTGAAAGTTTCCCTGGGAGGATTGTTCACCACAAATAAAACCGCCGAGCTGGAAAATCCAACCTTCTTTGGCAGAAAAGCTGACACATTCAACCTTCATCCTGATGAGCTCATTGTGGGAAGGATGCCGCCGTGCTTCTCCCTTGGGCTTGGAAAGGCCGTAATGCCTTACCTCCGGGAAAACGAAACGATGCCAGCTTTCTTCAAGGGACTGAGTGAAGCTGCAGGAATGGGACACGTGATACCAGATTTTGAAACGCTACTGCAGAAGGGTCTCGGCAAAATGATTGAAGAAATGAACGCCAACATGGGCGAAACCGAAAAGCAGAAAGAATTTGTCCGTTCCTGTATTCTCGCTTTGGAAGGAGTTCAGAAGTACATCAAGAACTTCGGTTACCTGGCAGAATACTTTGCTCACAACAGCGACTTTGCTTTATCTGAAGCCCAACGATCACACTTGAAGAAGATTAAAGATAGAATGAACAAGATCTCTACCGACCGACCAGAAACCTTCATTGAGGCTGTTCAACTGCTGTTCTCCTTCCACTGCTGCCTGCACCTGTCGGGGGAACCCACATCTATCGGACGACTTGATCAGCTCCTGGAACCTTTTTTCCAGGGACCCCCTACTGAGGAGGCCCAGGAGATTATCGACTGTCTCTTTGTCAAGCTGTGTGAACACGTGCATCTCAACTCACGGCTTTTGAATGATCTGGGTGCTTGGGGAATGACCGCTGTACCATATGCCAGCACGGGAATGTTTCCCAATGGCGATACTATCAACCAGTGGGTTCAGCAGATCACTGTGGGAGGTTACAAGGCCAACGATGCAGAGGTTCCACAAGATGCCTGCAACGCCATCACGAAAATGTGCTTAAAGGCCTCACGCAGGCTTCCCCTTAGTGCTCCATGTTTGTCCCTGCGAATGCATAAGAATATGCCGCAAGAGGTTCTTCAAGAGGCCGCTAAGGCTCTTCTCAGCGGAGGGGCCCATCCCGTCCTTCCTCACGACGACCACTTGATACAGGGCCTTGTTGAAGCGGGAACATCAGACGTGCCAGTGAGCCTAAAAACCGCGCGAAACTACGCCTGTGACGGTTGCTATGAACCAATCATTCCCGGCGAGACAGACTTCTCATTAGCTTACGTGCCTCTGTTGCAAGTGCTTGAGATGTCAATCAACCATGGGTCTACATATTCACTCGCTGGGCCTGGATTCTTGGAGGGGGTACCTCAGTCTCTGCCTACAGCTCATCCTGAGGAAATCGTCAGCTTTGAACAGCTCAAAGAGCTTTTTGCTCTTCATCTTCGTGTGCGGACAGAATATTCCATTTTCCTTCTACTCCTCAACTATGGCAACATCGTCGAGTTTTGTCCCAGTCCTCTGCTCTCTTCCCTCATTCGTGGCTGCCTGGAAACCAAACGGGATATTTACGACGGCGGCGCTAACTACACTTTGATTGGTATCCAGTTCATATCCTTCGCCAACACCGTCGACGCTCTGTACGCCATTAAGCGGCTTTGTTTTGATCATGACTCGGCTGTTATTTCCTTGGCCGAGCTTGTCCGCTGTCTCAAGTGTGACTGGGGATACAACATGCAAGAGCCCTTCCACGATGCGGTCGCGGGAACCACGCGTGGTCAGCGGCTGTCTGACACGTACAAGGAAGTACGTGAGAGGGCGCTGAGCCTACCGAAGTTTGGAACCAGCGCAGGTGCAGAAAACGAAGACGTTCAAAACATTACCAGTTGGTTAGCTGAGCAAGTTTCAACGGTCACCAAAAAAGTGGCCCGCGATGCTCCAGATGGACAACCGCTGAAAGGACTGATTGACGGCTTGAAGAAAAAGTATTCTGTTCCCGGAGCACCATGGGATGTAATGCTGCCTACAGGATCCGGGACATTTGAAGGATACGTTGGTTGGGGAGGAGGATGTGCGGCATCTGCTGATGGTCGACGCTCTGGGTCGCCGATTGCTTCAGACTTGAGCGCTGCTCCAACTTCATTGGATAAACCTGCCATACCGAAGAGCTTCGATATCTACAAGTCGCTTAAAAGCTGGAATATGAAGTCCATAAACGTTGGTTTTGCTAACGGTGCGGAGATTGATCTGAAAATTGACGAAACTTTCCAAGAAGACGACTTGGTAAAATTCCTGCAAAATTATGCTGAACAAAAGGAGGGCATTGGAGGAAATATCTTGACACTCACCTGCGCCAACCCAGACACCTTCGCTAAAGCTCAGCGGAATCCAGAGCAGTATGATCTCATCCGAGTACGCACAGGGGGCTGGAGCGAGTTTTACATTGCTTTCTTCACCGCCCATCAGAAACACCAGGAGAGGAGAATGTACTACCACACTACATGAAGTACAAAACGTTTACCTCTTAGGGCcatgaaggaaaacaaaactaccGTCAACACATTACTTACGATAGCACTTCGgaagtttttaaataatttttttaactctAGGAATAGGTGTGCATGCATACAGTCTCTTCCGAACAAGTTActgcttttttttaaaggataaaataaaataaacgcGTACAGTTAGTAATGACTTACTAATTTCacgaattttgaaatttttgtaatcTCTTAAGGTATGGCAGTTTTAAAACTAAAGCAATGATTGCACTCTAATTGTTAAGTGATTACCACACACATTAATTAACACACACTTAGAATACGTACAAATAACGCTGCTTACACCACTTATATACTTACAATGATAATATGGCTACTTAAATGAAATACTTTCAATACTAAGAGAGCatgcagttttcaattgagagtcgaaagtaatcaggcaattctCTATATATCTTtaaattactttggttttgattttactacggtttgaaattagctgagtagtctaattggtaagtaattggttgggttttggttttacggcacAGTCAATTGAAAGCCGCTCTATAACTACTTTAACTACTTACAGTACTACTTACAGACACTACTTGATAACGCTACTTACGATGCTGATAATATTCatctacttacactacttacaatacttatATGGCTACTAACTATACTTGCAATACTCACACGACTAATTTTTCCCCTTCCCTCCATTTCTTGTTTAGTTTAGCAACTTAAACTGCAAGTTGGGCAGTAATTAGTATGTAGTTAACCTTGTCAACTTATGCAAGTTCACTTCTGTTCAACGATAGTCTTTTTTGAAGacttaaaaagcaaaaactgagACCTCTTTCTGTCAGGTGTAAATTATTACTCCTGATTTTGATTTCGTTGATTTCATTAAAACTCAAGCCACATTGTGGCTAAGTAATTCATTctaattttcattgtaattttcaaatttagatATTTagcatttttctcattttgtctttttaataCCCGACTTAATAAGCTGCAAACTATCAAACCCTTTGGTAGTCTATAAAAGTAAAAGTTAACTACAAATTGTAGATGTTTTTTAAATTAGAGTCATAGTTTAAGTGGTTAGAAAATGTACCTTTTGACTGAATAAATCATACAAtcgc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02901	PFL-like	Pyruvate formate lyase-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011008	Homologous_superfamily	Dimeric alpha-beta barrel	Interproscan
IPR004184	Domain	Pyruvate formate lyase domain	Interproscan
IPR051215	Family	Glycyl Radical Enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43641	FORMATE ACETYLTRANSFERASE 3-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06972	PITRM1, PreP, CYM1; presequence protease	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala