Gene detail

Detailed information of XP_020625323.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_3301:570094...578718
NR annotation: XP_020625323.1, DEP domain-containing protein 1B-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020769664.1

CAATCACTGCACAGATAAGGTTTTGGAGCagatttcaaaatggcttctCGCTCTTGTTTACTCTCTGCGCCTCTGAAGGCAAGGAAAGGGTTTCTTTGATGTCAATGTGATTCTAGAGTGGTGAAGAATGAATACCAACACAACAAGTGGCAGTGAATTAAGCAGAGGTCCATTTTCAGCGACGAAACTTTGGAACGAGGTTGTACAACAGATGAAAAGTAGTGTTCCTGTAAAGAGAAGAAGATGGCGAATGAAAGTCTTCGAAGATGTGTTTGTGGCGTCTGAGGCTTTAGATTGGCTTCATGGATTCCTGAAAGAGAATCCTAACTTTGGAGCTGATGTTACTCGACAACAGGCTGTGCAACTGTgtcaaaagtttttaaaaaatggtaTCATAACGGATGCGCGCGGAAAGCAATATAATGGAATGTTCGAAGACAACAACCATCTATATCGGTTTACAGACAAGGTTCGCAATTTTCCGTTTAAAGCAAGCCGCTCCCCGAGAAATGAAAAGGTTCTAGAACATAAAACTGAGAAGGCCAAGAACGACACAGTACCTAGTGAAAACAAGCATTCGATCACTATTTACAAAGATGAAATGAAAGCTGATTTTAAGGAACTGCAACAAGAAGACAGGCCAACGCGATCCGTAAGAGAAGGACATAAATATAATCTCAGGTCCACTCCATTTACGATGGAACCTTCAAGAACACCCCTCGTCAATAAAATGAATGTTTTGAGTTCTACGAGAACTGATCCGACTCATGGACCACTCAAAAGTGCAGCTAAACGAAGGAGAATTTGTAGAGAAGACAGCGATGTTAAAGAAGTGATAATGAATCCAGCAGCATTTATTGCTCACAACCGACGCTCGTTAACTGATAAAGAGATCAGTCAAGTCTGGTGGAATATTGCTACCACTCGtTTAAAGAGGCTAATGGATCTTGATGATTCATTTGTGAACTCCCTCAAAATTGAAGACTATGACATCAGTTGTGTGTGTCTCAATTCACAAGCTCAGAGAATTCCCAGAGTGCAAGCGAATAAGGTACTGAATGGACCAGatgcaagtttgttttgtcatgacACCAGTTCAATACAAGCCATAGAAGTCTTACCCCAATGGTTGATATCTGCTATGAAGTGCCTTATACACTGGCCAAATGGTGATTACTCCAATCGAAGCTTTCCGAAGTATGGAGGTTTTGAGCGAGATGTGTTCAAAGCTATCGTGGAGTTCTTTGATGATGAAGATAAACGTCCACTTGTCCCAAGACATTTGCTAAGAGTCTTCCAGAAGACAGTAGATCATTTGTTTAAATGCAAGCTGACAGCCATGCGTTCTCTGCAGTACTGCTGTTTATTGATTCCAGTTAAGAACAGAGAACTGCTGCAAATGCTGTTGAAATTTATGGTTAAGCTGATGGATAATCATGTGATATCCTTAAGTGATGAATTACCCACCAAAGAAATGCTTATCCAGTCCTTTAGTCGTGCAATATTTGGTGTTTCTTCGGACATGGATGCAATTAGGCTTGTTTACTTTATGATGGAAACGtttcctgaatttttcaagAATCCTGAAGGACTTCAATTTCAAGTTGAACAGCGACTCTTATTCTTGAAGAATTGTCGAGAAAACAAGtcaGTTATTGTGCCTCCTGAGGGCCCCGTTGTGTCCTTTTGTGAACGGGTCACGCCACAAGAATACAAAGAACAATCTCTAATTACATCACAGCGTTCCTTGAAGGACCTTCTCAACAGAATTGTCGATGATGAGAGTTTAAACgcgaaagacaagaaaaaacaactgaaacagTTTGAGAAGTCTTATCCTGATATCTATCAAGCAAAGTTTCCAGGAGACAACTTATCAACCTGTTCACAGAGGTCACAGAGATCAGAGAAACTTAGACAAGTTATGAAGCCGCTGGCTATACTTAAGAACTTGCGATAACAGAACTCTCTTGAAGGACCAAACTTGGTGGTGTCTTATGGCCATTTGCTGGACTTCTTCCTGTTTATTACTTTTAACAAGACCAAGTAATTTGGAGTATCTGTTGTATCCGGTGATCCCTGTGGTACAACCGTTCATTGTTAGTCCCTTCCGAGAagggttttattttttcctcgtcGCGCAAAATGAAAAGGCCTAGACTTACATACGagattgttttattatattttttatatcatATATAGCATTTTAAAGCTTTCATATTTTAGGAATAATGTTTTAATCAATTGACTGATCGAGATTAACTATTATATATACTATTTCTGAGAGAACTGTCATCAGATCGAAGCCGAGAGATCAATCGTAGCCGgaatgtttcctttttgtgggattttatacttttttttttcaagttttcttagCCAAAATTTCAACCTCCCCCTCAGGTCGGGAGTAAGAAAACGGAAAAGAGAGATGAAATCTTGTGTTTATTTGGGTTCTGTAATTAGGACCGTACCTGTAGTACTCATCGTCATAATATATTCATTTATTCGATATCAGTGGAAAACAGAGCTGAAAATGAATCGA

Protein

Uniprot

Uniprot term	Description
Q8BH88	DEP domain-containing protein 1B OS=Mus musculus OX=10090 GN=Depdc1b PE=2 SV=1
Q4R623	DEP domain-containing protein 1B OS=Macaca fascicularis OX=9541 GN=DEPDC1B PE=2 SV=1
Q8WUY9	DEP domain-containing protein 1B OS=Homo sapiens OX=9606 GN=DEPDC1B PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00610	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000591	Domain	DEP domain	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16206	DEP DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20639	ARHGAP18_28_40; Rho GTPase-activating protein 18/28/40	-	Membrane trafficking	ko04131	deepkoala