Gene detail

Detailed information of XP_020626097.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_398:2141258...2151689
NR annotation: XP_020626097.1, uncharacterized protein LOC110063458 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020770438.1

atgttttgctCAAACTGTGGCGCTGAGACGGTTCCAACGGCAAACTTTTGTACCAGATGTGGTCAAGGATTTGCTTCGACCTCGTCAGCTCAGTCGACAGAGTCAACAATATCAGAGGATGTAAAAGTATCCAACAAAGCCCCATACATAGTAATATTCTCAAAAGCAATTGAAAAGTGGAAGGCATACCAAAGCCAACTCTACATAGAAGAAGAAGAGTATATGCTGGTCTATGAAGATGGGAAGCAAGCCCAATTTCTGCCAGGAACTGTGGAATTTTTCAACCTTCTAAGGTATCATGAAGAAATTGGAAAAGATTACAAGAGAATTGTTCTTTACCTATGTACAACAACGGCCATAAGAGCTGCTGAAAGAAGTCGGCAAGAGGGGTACAGCAGTGGAAGTGAGAATTCAGAGGATGAGAATCAGTTCAGGCCAGGAAAGAAGGCAAAATCAGAAATCGACAGAGATGAAGAGCTAGCAAAGAGCCTTCAGCTAAAATTTGATCAGGAAGCAGGCCAGTTTGATGTTACAATAGCTGGTGAAGGGAAATGTGCAGCAAATCCTACAAGTTATGGCTGTGATAGCATCCAAGAGAATTCACCCATGCTTAGTGCTGAAACCATTGTTGCTGTTGACAATACAACAACTGTACCCAACTGTCCTGAACAGAAAGTGACACCGTTTACAAGCAGTGAAGACCTATTAAGATCTCTTGGGAACTCTGTGGATGAATCTGATCAGTTTTTTCTTGTTGTCAGGAGAGGGTCATCTTTCCAGAGGCAAGTTAAGATTTGGCAGCGCGAGTCAAAGAGAAGCTCTCCTGAAAAGGTCCTGAGGGTTCACTTTGCAGGGGAAGATGGCATTGACTCTGGTGCTATGGCACAAGAATTTCTAGCATGTGCAACGCATGAAATTGGAAAGCAATTTTTCCCTGGTGGTGTTCCTGTAGATTCTATGTTGCATGTTCATGATGGTTTTTTTCTTGCATGTGGGCAAATTGTAGCAGTGAGCCTTGTCCAAGGAGGACCTCCTCCTCGTTTTCTAACTGAGGGCTCATTTCAGTTGCTGGTCAATCCCAATATTGATATGAATGAATTGAAGGAAGACTTCCACTTGACCTCTGATGAAAAATCATTGTTAGAAAGTATCAGAGAAGATCCAGCTCGCTATCAGGATACCATTTTCGAGCATGGATACACAGGCGTCATTGATGCAGATCACATAAATGACATAACTGGTACAGTAATGGTTAGTCTTCTCAGTAGAAGGGCCTTGTTTCTAAAGGAGTTTGGAAAAGGTCTTGAGCTCTTTGGTTTAGCGAGTCTAGTGAAGGGGAATGCTGATCTTTGTAAGCCGCTCTTTGTGAAAGATACTAAGGCAAACATTGTTGATGCAAACTACATCGTTTCAGTGTTGAAGCCTATGTATTCACTAGAAGGAACCTCTAGGAGAATAACCGAGGAAGCGGTCATTGATAATTTCCAAGATTTTCTAATGAGGCTTGAGGATGAAAAGCTTACACCAGCAGGCGTGTTAGGATGGCTCACTGGTCAACAGCATAGGCCAGTTAATGGTGATGACCTTGCCATAACTGTTCTGTTTGATCACGAATGTGTGCAGAGAAATCCGCTTCATAGGGTATGTTTCCCTGTTGTCTCCGCCTGTGGGAAAACTGTGACATTTTCAGTCAGTCATATGGAAAAGGCTGAAGAGTTTGCACGCATCTTTCTAATGGCGTATTGTAAGGGTCAGGCTTTTGGGAGACGATGAGTGCAAAGCTGACAGTAACATTAGTAATACTTGTAGTGTTATGTGCCCTTGAAGATGAGGCTGGCCTAGACCTGAACTTCATGAAATGTATTATAATTCTCAAAACACTAccatttttttacttttactgatGGCATTTCTTTACATTGAAGGTTTTGTTTTACCATGTTTGTACACTGCATAAGAAAGTGATGTCTTTGAGATGCCACCTTACCATTAATAATGTGACAGCTTTTATCATGTTAGCGTTGAAGAGAGAAGCTGGCTTtcagctttgttttgttctgtcaaTTGATGCTTTGACACTGAAGTAACTCACCTGCAGATGCATGTGTTGTATAATTGCATCAATCAGTTTGGTTCCTGTTTTCATTAATAAATGTTAACTATATAGTTAAATAACAACACAATACCAGTGAGCTTAAGTGGTTGACAAcagcattttgtaatttaaCTGCTGGatgtaaagtttaaaaatttatagTAATTGTTACgattgtttttaattaagaaTAAATGACAGTTATATAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13240	zinc_ribbon_2	zinc-ribbon domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR026870	Domain	Zinc-ribbon domain	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala