Gene detail

Detailed information of XP_020626301.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_412:1576861...1581200
NR annotation: XP_020626301.1, amiloride-sensitive amine oxidase [copper-containing]-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020770642.1

TGGCCAGCGATATACTGTGAAAGGCCACCATATTAGCTACATGTCGTGGTCTTTTGACTTCAGAATGGACTCCAATAGTGGAATACAGCTTTACGATATCCAGTTCAACGGAGACAGAATCGTATACGAGCTCAGCCTTCAGGAGGCGGCCGCCACATACGCAGGTTATTACCCACTCCCGTCTTGGAATAACTTCATTGACGGGGCGTGGAAAATGGGACAGAGCAGCTATGAGATGGTCCTTGGAGTGGATGTCCCAGAAACAGCTTCCTGCTTTGATCTGGTGCACATGATCGGAATGGAAAGTCCGAAAACCTTTCGCAACGCTGTCTGTGTGTTTGAACTGAATGATGGAATTCCACTGCGTCGACATTACGATAACAACTTTGTGAATGGGTACAGGTTCTACGGTGGAATGGCCAATCAGGTATTAATTCTGCGCACGATTGCCACGGTATATAACTATGATTATTTGTTCGACTTCATATTTTACCAGAACGGCGTCATAGAAGTTAAAATGTCAGCCTCTGGCTATATCTATGGTTCCTTTTACGACGCTAATATGCATCCATACGCTTATCCACTGCACGAGCATTTCACAAGCGGTACACACGATCATCTGATCAACTACAAAGTTGACTTAGACATCGGCGGACGAAAGAATTCATACGAGACCATCGAAATTGGTATTGAAAACATCACTGAGCGCTGGTTCCCCAACAGAAGACGTGTGCAGAAAGTTCTAAAACGAAGCGTGAAGACAACGGAGTTGGAGGCTGCGTATAAGTTTAACTTCGACCACCCAAAGTACTTGAACTTCTTTAATGACGCCGAGGAGAACAGGATGGGTGTAAAGAAGGGGTATCGCATACAGCTGGAATCCATGTTGAAACAGCTGTATCCTGAAGACTGGATGATCACGCCCATGATGAGCTGGTCCCTATATCAAATGGCCGTTACTAAGTACAAAGAAAATGAGACCCAGAGTAGCTCCATCTATAACCAAAACTCACCTACTAATCCACAGCTTGATTTCCGTAAGTATCTTATGGATAACGACTCCATCGTGAACGAGGACCTTGTAGCCTGGGTAACAATAGGAGCCATGCACATTCCACACTCAGAAGACTTGCCCAATACCGCCACAGCTGCAAACTCCGCCCACTTCTTTATTCGACCTTTCAACTACTTCGACGAAGACCCTTCCATGGGATCGACAAACGCCATCTTGATTACGCCCAAAGACGAGAAGTTCAACGGACAGAAGGTTGAGCGATATGGGACCCCCACTGGACCACATTGCATTCCCAAAGAGTACAAGACTGACTTTAATGGCACTTATTGATCAGTCCCGTTGTGGTCCCAGGGACCAGGGCTTCCATTGTTAGAGGggtggggatgctcgtcggaaaaaaaataataaatcatatTGCATGAGACCAATCCGGTCCCCTTAAGGCCCCCTAAAGGGACCATCTAAGACCGACGGTAATAAAAGTGCTGCACTAACTTTGTAGATGATAAAGACGTCATCGAATGCCTTCATTTGTGAACAAATTTTATAGATTTTATGGCTGATCGATCTAAGTGTATAACGAACTATCGTATCGTATAAATTCTTACAATGCCGTCGGGATtctcctatttttttttttttattccagccCTTTCTAGCTCATTGCAAGGTATAAGTATGCAAAAGTTATCATAAATAGCCCTTGAATAGACCTAAGCGTCCCCGTCCATTTCACGTGAAAGTCTCTTTGTTTATGAAGCGTTTTCTGCggatgttaaaatattttcgtAATCGACAAGTGTTTTACAAGAAATATGAAGCGACTGAATGCATGCTAGattcgatttccagccgttttgggagtctGGTTTTCAGCCCCTTTCCATGTGTGTTACGAACATGGTCTTTAATAAGACGGCTGAAGATCGAACACCACTCAGGCTAGTGTCTGAGAGGCATTTATGAGCCAATGTGCAGAAGCAATAATGATCTGGGTAATCTAACCTCAGGCTAACCTGTAACATTTTGAGTTCAAAATGTCTAAAAACTGGTTGgttcaaatttccttttaccTGGCTGCTGAGATTAAGGTTGAGcattgaaatgaaaggaaaaactcTAAGGTTGTTTCAAATTTAGGGGATTGATTTCTTaatcttaaaatttcaaaaagaggCAGCTTTAAGGAAACCAGGcctctttatcttttttttctgtcccaTTGATAAGACATGATTTATTTCCATTCGAGTATTTTGTGTTTCAgatttattaaaacaaattcattgtAACACttgttttgtattaaaataataaacttctcaaaattaaaacaaccagATCGGTGAATTAATAGTAGTTTGCATTGAACGTTCGACTATCAGCAGAGGGAATTACTGAAAAATGGATCGGAGTTGTCTATGGGTAGTGCTTAATTCTCCACCCTGGAGTCTACAGTCAGTTTCGGCAGGCGTCGTTGGACAAGCGGCCTGACAAAAATActgtggggggtggggggtggggggcgctGCGATGGATTGGGCCCAGACCCGAAATGATAGAGAAATTTCCCTTAGATGTTGTAGCGGGGGCATTGACCTCCCTAGCTACCTCCCTATAGCTATCCACCTGCCAATCTGCCCCCTACCCCACCCACCTGCTTACTTGTTTTCCTCCTTACCTACCAATCTGCCTACCTTCCTTCCTGTCGTCATaccaatttttcaatttttttgtgcaaaattCCTACTCTTGTACGCATCCCTTTCTAATACAGGTAGAGGTCTCTTTTTCAAAAGTGCAAGCCAAGTTTTGGACCAAATCGTAGTGACAAAAGGATACTGAACTCGTACCCTCTTAATGCTAAATTGACCGGAAACGTTTCAGGGAGTGTGGGAAAGGTCGAAGTTGCGAAAATTGACTCTGCGAAGGTCGCATCGTTCGCAGTTTCATAGATGGGCAAAGGTATTGTTGCTGCCACATAGAATGGTCAAAATCAATCGCGCCAGCCTACGGATTATTTATCCATGGATAGTCAGTGGGATCTAGGAGACCAAGGAAATATAGTTTCCGGGGTGTACTCTTTCCTGAGAAATGGCGAAAAAAATTGAGCCGGGCTTTCCTTCTCCTTTTTGGACAGCCGAGACATCAGTTCTTTGCAACCTACGTTTTTTCCAGCACCCGGATGAATCGGCCACTGCAGTCAATTTTTGTTCCTGATATCCTCCGTGCGATCGATAAAGGGAAAGAAGGAGATTGCTCGCAGTCTACTGCCAAGcggttttttaatttaatttaattaattaattaatttatttatttatttattgattgattgatttatttttcattctttgaGCTACCCGACCAAAAGGTTGTGAAAACTATTTGTCAGCCAGGGAAATGTGGGGTCTTTAGCATGCGCAATCCTGGACGCACAAGGCACAAAAATGTTGATATATAAAAAAGCTCTATCGATCCTATAAACGAAGAAGAATTTATACCGTCTGTTATTAGTTTGTCAGGCGCGCTCCTTTTACGGCCGTTTTGGGAGTAGTCCCCGTCCCCGGACCCTTCGTGGtgtggataaaaaaaaaagaaaaaaaaaagaacactggtacacaaaacggctggaaat

Protein

Uniprot

Uniprot term	Description
P19801	Diamine oxidase [copper-containing] OS=Homo sapiens OX=9606 GN=AOC1 PE=1 SV=4
Q8JZQ5	Diamine oxidase [copper-containing] OS=Mus musculus OX=10090 GN=Aoc1 PE=2 SV=1
Q9TRC7	Diamine oxidase [copper-containing] OS=Sus scrofa OX=9823 GN=AOC1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01179	Cu_amine_oxid	Copper amine oxidase, enzyme domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000269	Family	Copper amine oxidase	Interproscan
IPR049947	Conserved_site	Copper amine oxidase, copper-binding site	Interproscan
IPR049948	Conserved_site	Copper amine oxidase, TPQ-binding site	Interproscan
IPR015798	Domain	Copper amine oxidase, catalytic domain	Interproscan
IPR036460	Homologous_superfamily	Copper amine oxidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10638	COPPER AMINE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008131	Molecular Function	primary methylamine oxidase activity	Interproscan
GO:0009308	Biological Process	amine metabolic process	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00276	AOC3, AOC2, tynA; primary-amine oxidase	EC:1.4.3.21	Tropane, piperidine and pyridine alkaloid biosynthesis	ko00960	deepkoala