Gene detail

Detailed information of XP_020626875.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_449:2172920...2199067
NR annotation: XP_020626874.1, tyrosine-protein kinase CSK-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020771216.1

TCTGCTCATTTCCTGTGAAGTTCTTCACTGAGGGCAGATCGGTTCGACACTGTACCACGGAAGTCGTAGTCTTGAGGTTTGTTGGACCGAATTAAAGGCTTGCTTATTTTAAATAGGTCATCTGAGGATTCAAACAGTTGAGAACTGTTGTTCCTGGCAGCAGGTTCGGACCAGAGAGGTCCCAATGACTCACCATGTCCAATAACGGAAGTCAGGTACCAGTGTGGACAGCAGGAACTGAAGTTGTGGGGCGATTTCAATTTAGAGCCAGGACACGAGAGGATCTGCCTTTTGAGAAAGGTGAGGTGCTGTATATTGAAAGTGTTACTCGGGATCCTAACTGGTACAGagcaagaaatggaaaaggaCGTAGAGGAATGATTCCCTATAATTATGTAATAGAACACAAAAGAGGTGTAAAACTTCATGCCATGCCGTGGTTTCATGGGAGAATAACAAGAGAACAAGCTGAAGATCTTCTTAAGCCAAAGGAGAGCAACATGCCCTTTGAAAAAGGCCTGTTTCTAGTCAGAGAAAGTCATAACTATCAGGGAGACTACACCCTTTCTGTTTGTTCTGCTGTAGGAGTTGAGCACTACAGAGTAAGGTACACAGATGATAACAAACTGACAGTTGATGATGATAGCTTCTTTGAAAATCTCACAAAGCTTGTAGAGCACTATCAAGATGATGCAGATGGACTCTGTACACGACTAGCAAAACCATTGGAAAAGAAAGgaggaaaatttgatttctctgtTGATCCAGACTCCTTTAAAAAAGAGGGTTGGTCAATTCAGCGCCATGAACTACATCTTGGAAGGTCAATTGGAAAAGGAGAGTTTGGAGATGTCCTTCAAGCTGAATACAAAGGACAGAAAGTAGCTGTGAAATCACTCTTAGATGACAGCCATGCTGCTCAGACATTCCTAGCAGAAGCTTCTATAATGACGAATTTAAGTCATAAGAACCTTGTGAAATTACTTGGTGTGTCACTGGATGGAAATCCTATTTACATTGTAACAGAATTTTGTGGAAAGGGAAGTTTAGTTGAATACTTAAGGACTAGGGGCCGGACTGTTATTGGGCAGAAAGATCTTGTAGGGTTTGCTAGggatATAGCTGCTGGTATGCATTATTTGGAGTCAAAGAATTTGGTTCACAGggACTTGGCTGCAAGGAATGTTCTTATACATGAAGATGGAACAGCAAAAGTGTCAGATTTTGGACTTGCAAGAGAAGCTAACTTCAATTTAGAAGGAGGAAAGTTCCCTATCAAGTGGACTGCACCTGAAGCAATTAAACAAGGGAGATTTTCTACACAATCTGATGTGTGGAGTTATGGTGTATTATTGTGGGAATTGTTCTCATTTGGTAGAACACCATACCCCAGAGTGcACATAGATAGTGTAGTTGAGATGATCGAAAGAGGGCATCGTATGGATTGTCCAGAGGGATGCCCTAAACAAGTTTACGATGTAATGAGAGACTGTTGGGACATTGATCCAAGGCAGCGGCCAACATTCCAGACGATATATAGAAAACTAGATGAAGTTTACCGATCATTTGTACCTGTTGGCAACTGAGTCTTGAAAACAGTTATTTACCTTTATACGTACTAAGCCATACCTATGTGGAATTGTGATATGCTTTAAATGCTGATAAAAAAGATCATAAtatcaaattttcctttctggGCTAGTAGTGCTGTTTTTCAGTTTACCAGTTGGTAGACTTAATCTATAccacaattttcaaaattccatTGAAAGTTAGTTAATAAATTTctttatgtttcattttcaaagtaaTGTATAAGGATTGTGTCTTACCAGTTAATTGTGGGTTTATGAATGTTTCACAAAATATTGAGTTTTCAAGAGTAACAGTAACCTCTTCATAAGAGAAATACATTTGTTAATCTAGCATTATGTCTCTATTTATCtgttaaatttgtttatgtGTTTTAGACAACTGTAATGTGTAGTTAGGGGAATGTTGCAGTATTCATGGTAAAAATTGTACAtggctaaaaatattaaaacccTTTTTTGCTAGTCCCTTATATTTTTATACCATTTAAAATTAGCTTTAAGAGACCCTCTGCATATTTAAGAAGCATTTTCTTTTGATATTGTCTTCCTTGCATGTTTGGGTAGAAAAGTATATAAGAAATGAGATTGAAACTTCATAGGAATGAAATAATTAGTTATATTTTCTTATTATGATACCCAGAATTGTTAATTCTTTCAATTGTTTtaggaaattgttaaatttgttaTAATAGTAAGAAGCATGTAAATTATGCATGGGGTCTGTAACATCTTAGTTTTTGTAAAGGGTGTAAAAatgttctaataaaatttagatggaatttaaattttttaattcccCCATCTAA

Protein

Uniprot

Gene family

Uniprot term	Description
P32577	Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1
P41239	Tyrosine-protein kinase CSK OS=Gallus gallus OX=9031 GN=CSK PE=2 SV=1
P41241	Tyrosine-protein kinase CSK OS=Mus musculus OX=10090 GN=Csk PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR050198	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004715	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05728	CSK; c-src tyrosine kinase	EC:2.7.10.2	Exosome	ko04147	deepkoala