Gene detail

Detailed information of XP_020627961.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_525:693676...705421
NR annotation: XP_020627961.1, AP-4 complex accessory subunit Tepsin-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110065195

ATGGCGGGACAAATGGCAGCAAACGCGTTGGAGAAAGTTTCAGATACGTTTTCGTTCGCAAAGAAGATTCCGATGCTGATGAAAGCGACCTCAGACGACGATAATCCAACATCTGGCTACATATACCAAGAAGTCAACAGTATAACTTATGAATCAATTAGCAGCTGCAACTCTCTTTTGGATTTTTTAGTTGGCAGATTGAAAAAACAATCTCCACATATCAAATACAAGGTTCTTAAAATCCTGTGCTACGTAGGAAGCAATGGCCATTCTGAGTTCAGAAGTGCACTTCGACACCAAGCGGGCATTGTTAGAGAAGCTGAAAGTTTTACTGGTCAAATGGATTATCTAAGAGGTGATGCCCTTAATCAGCGAGTGAGAGCTGCAGCGTCAGAATTGATTGAACTTCTCTTCAATGTTGAGAACACTGGATCAACAACCATGCATGCGATGACAGGACCAACTGGAAAGAAGATGGAAGGATTTGGAAATTCACCTTCACAACCAGCAAAGAATAAAACATGGCTAGACTCTGTAAAAAACCTAGCAGAACGTTTTCCAGATACAGCTAGTCGTTTGACGTCCAAGAATGAGAAAGAATACATGCCAACAACTGGTGGATCAGGCATTACATTTGTGAACTACTCTGAGTCTTCAAATGTTGATTCAGGTTTTAAGACATTTCTGGATGGTGAAGACTCTGATCAGTCAGCAGAGGACCAAGAAGCAGGTGAACCAGAAAACACGTTGTCTGTAGAGGGTCATCTTGTTGACAATATCACATCTGAAGGTGGAATACGTGCTGTGCCTTCTAAAGAAGCCTTGAACCAGTTCACAAAAAGGTGTTCTACCTTGAATCTTAATAAAGTGCTGGAGGCTCTAAACAACAGATTGTTGGAACCAGTAACAGACGTGCAGTTGAAATCACTCCATGTCTTAGAGCATCTCTTAAAAAGTGATATTCCTTGTGTGGCCAGTAGAATGTCTCAACATTGCACAAATCTACAAGAGATTACAAGAACAGAAAGTGGTAATGTGCTTTCTAAAGCTAAAAAGATCATCTTATTGATTAACGTAAAAGTGGAGAAAGAGAAAGTCCAAAAAGACGTTCACACTACAAGAGAGGTGGCCAGCGAGGATCTTTTAAATGTGGGTGATGCTCAAAGTTCCTTTGCACAACAGTTTGCAGTGGATGACACTCCAACTCTATTTTCTGGAATGAGTTTGCACTCGAAGACAGAGATCACTTCAAGATCACAACCGTTTGTCTCCAATACAACTATTTCTGAGAAAAGACCCTCAGAGGACGTACTTGATGTTTTTCAGGGACTTGATCTTTCCAGTAGAAATCACACGCTAAAAAATGAGAACAGTTCCAGACAAACGTCCCACAGTTCGAAATCAGAGTTAGATGATTTGTTCTCTGTGACTGCAGAAAATACAGGACCTACTTTCGTCAGTAAAGGTCAAGAACCCGTCAAGGATAGCGTGACAGATCTGTTTGATCCCTTGTGTAACGACGGTGCGAGTTCTTTTGGAACACATGTCACGCAGCCTTGCGTAACGTCAACCATTGAACCAGGAAATGAACGTTTTTCGGATTCAAGGACGAACAGTGAAACAGGCCCACAGCTAATAAGTTATAGAAACAGTTTGATTTCTCCTCAAGGCAATATCTTACCACCAGTTAGTTCGTCAAATGAAAATAGGGTCAACCCAGGTTTAGATGGCTTACATGCTCTCAGTAATTTGAACAGTTTGTCACACAACAGAACTACGGAACCTCAGGTCACGTTGCCAAGGAGTGGTTTACTAATGGCAAACCAGCATTCCTCAAATTTTCCGAACAATTCTCATCCAGCACTCCAATTTTCTGGTTTAAGTGGCTCTTCCACGATTCCTTTGAGACTTCCGAAACAGCCGAGTCAAAGAACGGACTTCAGTTTTGTGGGGAAATCTGGCAAGGCCGATGCGTTCAGTTTTGTCCAAGATGAAATGAAGGCGAGAAAGTAG

Transcript

rna-XM_020772302.1

GCGTTGTATCGCCTCGCTTCTGAGTTTTGTGTTCTTACAGGAAAAACCGCATAGCAAACAGATCGCGGCAGCAAAGTTTTgtcattcaagatggcgggacaAATGGCAGCAAACGCGTTGGAGAAAGTTTCAGATACGTTTTCGTTCGCAAAGAAGATTCCGATGCTGATGAAAGCGACCTCAGACGACGATAATCCAACATCTGGCTACATATACCAAGAAGTCAACAGTATAACTTATGAATCAATTAGCAGCTGCAACTCTCTTTTGGATTTTTTAGTTGGCAGATTGAAAAAACAATCTCCACATATCAAATACAAGGTTCTTAAAATCCTGTGCTACGTAGGAAGCAATGGCCATTCTGAGTTCAGAAGTGCACTTCGACACCAAGCGGGCATTGTTAGAGAAGCTGAAAGTTTTACTGGTCAAATGGATTATCTAAGAGGTGATGCCCTTAATCAGCGAGTGAGAGCTGCAGCGTCAGAATTGATTGAACTTCTCTTCAATGTTGAGAACACTGGATCAACAACCATGCATGCGATGACAGGACCAACTGGAAAGAAGATGGAAGGATTTGGAAATTCACCTTCACAACCAGCAAAGAATAAAACATGGCTAGACTCTGTAAAAAACCTAGCAGAACGTTTTCCAGATACAGCTAGTCGTTTGACGTCCAAGAATGAGAAAGAATACATGCCAACAACTGGTGGATCAGGCATTACATTTGTGAACTACTCTGAGTCTTCAAATGTTGATTCAGGTTTTAAGACATTTCTGGATGGTGAAGACTCTGATCAGTCAGCAGAGGACCAAGAAGCAGGTGAACCAGAAAACACGTTGTCTGTAGAGGGTCATCTTGTTGACAATATCACATCTGAAGGTGGAATACGTGCTGTGCCTTCTAAAGAAGCCTTGAACCAGTTCACAAAAAGGTGTTCTACCTTGAATCTTAATAAAGTGCTGGAGGCTCTAAACAACAGATTGTTGGAACCAGTAACAGACGTGCAGTTgAAATCACTCCATGTCTTAGAGCATCTCTTAAAAAGTGATATTCCTTGTGTGGCCAGTAGAATGTCTCAACATTGCACAAATCTACAAGAGATTACAAGAACAGAAAGTGGTAATGTGCTTTCTAAAGCTAAAAAGatcaTCTTATTGATTAACGTAAAAGTGGAGAAAGAGAAAGTCCAAAAAGacGTTCACACTACAAGAGAGGTGGCCAGCGAGGATCTTTTAAATGTGGGTGATGCTCAAAGTTCCTTTGCACAACAGTTTGCAGTGGATGACACTCCAACTCTATTTTCTGGAATGAGTTTGCACTCGAAGACAGAGATCACTTCAAGATCACAACCGTTTGTCTCCAATACAACTATTTCTGAGAAAAGACCCTCAGAGGACGTACTTGATGTTTTTCAGGGACTTGATCTTTCCAGTAGAAATCACACGCTAAAAAATGAGAACAGTTCCAGACAAACGTCCCACAGTTCGAAATCAGAGTTAGATGATTTGTTCTCTGTGACTGCAGAAAATACAGGACCTACTTTCGTCAGTAAAGGTCAAGAACCCGTCAAGGATAGCGTGACAGATCTGTTTGATCCCTTGTGTAACGACGGTGCGAGTTCTTTTGGAACACATGTCACGCAGCCTTGCGTAACGTCAACCATTGAACCAGGAAATGAACGTTTTTCGGATTCAAGGACGAACAGTGAAACAGGCCCACAGCTAATAAGTTATAGAAACAGTTTGATTTCTCCTCAAGGCAATATCTTACCACCAGTTAGTTCGTCAAATGAAAATAGGGTCAACCCAGGTTTAGATGGCTTACATGCTCTCAGTAATTTGAACAGTTTGTCACACAACAGAACTACGGAACCTCAGGTCACGTTGCCAAGGAGTGGTTTACTAATGGCAAACCAGCATTCCTCAAATTTTCCGAACAATTCTCATCCAGCACTCCAATTTTCTGGTTTAAGTGGCTCTTCCACGATTCCTTTGAGACTTCCGAAACAGCCGAGTCAAAGAACGGACTTCAGTTTTGTGGGGAAATCTGGCAAGGCCGATGCGTTCAGTTTTGTCCAAGATGAAATGAAGGCGAGAAAGTAGAAAATTTACGAGACCTTATAATATGTTTTTAAGTCTCTGTGTACATTGTAACCTTAAAGTATTACTTTGCCAAGGTACGAAAACACCAAAGATGAACCGAACCAAGCCGTTGgtcaataaaattatatttagaaAAAGGCGTTTAAAAATAGCTGGCAAGCGCGATCAGTCTGGAAGAAAAAGGAGTGGTCCAGCTGAAAGATCTGGACTGCGAGGTTAACTAATCATATTGCAggaaaaaacaggaaaataaaagttCTTACGGCTGGTAACGATTTCAGCATTTTCCTGTTCTTTTACTTCAACACTGTGGTATTCTGTTAAAGAAGTGAAACAATAAAGAACTGGAGAAGATATGCCAA

Protein

Uniprot

Uniprot term	Description
Q4V832	AP-4 complex accessory subunit tepsin OS=Xenopus laevis OX=8355 GN=tepsin PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01417	ENTH	ENTH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039273	Family	AP-4 complex accessory subunit Tepsin	Interproscan
IPR008942	Homologous_superfamily	ENTH/VHS	Interproscan
IPR013809	Domain	ENTH domain	Interproscan
IPR035802	Domain	Tepsin, ENTH/VHS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21514	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0032588	Cellular Component	trans-Golgi network membrane	Interproscan