Gene detail

Detailed information of XP_020628127.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_551:555233...560221
NR annotation: XP_020628127.1, zinc finger protein OZF-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020772468.1

GCGAAAAAAAAGGAGGGcaagcgagagaaaaaacgagCGGGACTTAGAATAGGCGTTCCTCTCAACCCAAGTTAAACAGTTAAACTTCCAAATTATGATCTCCACGAAATATAAAGTCTTGTACACATCTACAGCACAGTTTCGCAAAAGCtggaaattttctttgtattcatGATGTATCATGTTAAACAGTGGTTGTGTTTTAATCTCTGTATCTTCTTCTCAGTATCTGCCCTGCAAGTGTGACCCTAGGGTAAATTACACAGAAGTTCTAAAAATGAGTCTAGCTTTGACGAAACCCTTTCTGCAGAACTGCGACCTGTCacagtaaatttctttttaaaaattaagcaCCTGACATTCACAAACACATCTATAACCCATTTGTGTCGTAAATCAAGTTTTGTCCAGTGGTCCTTGAATCCAATCCAACTTCCAACACAACATCCAATCCAGGCTTTCCTCTGCGAAAAGACTGGGAGCTACTGAAGGATTGCGCGCCACGAGTTTGATGGACTAAACGATAGAGTTTAAATGAGAAACGATTTTCCTTCAGAAGGTACATGTAAGAGGATGTTTAGAATACCTTTCAGATGTACAGAAATGATGGAATGAACTGCTATGAAGTCAAAAGTAGGGAAACCTGAATCAGTACACCCAAGGGAGAAGCCTTATCactgcaaacagtgtggaaagtgtttcaaCCAAGCGGGACATTTGAAAAGTCATTTAAGAGTCCACACTGGTGAAAAGCcttatgaatgcaaacagtgtggaaagtgtttcaGCCAAGCAGGAAGTTTGCAGAGACACCAATTAGTTCACACAGGTGAGAAGCCAtatgaatgcaaacagtgtggaaacACATGGTTCAAGCGAGCAGAACATTTGAAGAATCATTTGAGAGTCCACACTGGTGAAAAACCCTAcgaatgcaaacagtgtggaaagtgtttcaGCCAAGCAGGAAGTTTGCGGAGACATCAGTTAGTTCACACAGGTGAAAAGCcttatgaatgcaaacagtgtggaaagtgtttcaaGGATGTAAGAAGTTTGCAGGCGCATGAATTAGTTCACACAGGTGAGAAGCcttatgaatgcaaacagtgtggcAATTCCTTTAAGCGAACTGGAACTTTGCGAAGACATCAATTAGTTCACACAGGTGTGAAGCCAtatgaatgcaaacagtgtggaaagtgGTTGAAGCGAGCAGAACATTTGAAGAATCATTTAAGAGTCCACACTGGTGAAAAGCcttatgaatgcaaacagtgtggaaagtgGTTCAAGCAAGCAGAACATTTGAAGAATCATTTGATAGTCCATACTGGTGAAAGACCTTATGgatgcaaacagtgtggaaagtgtttcaaGCAAACAGGACATTTGAAGGCTCATTTAATAGTTCACACTAGAGAGAAGCCTTATGAttgcaaacagtgtggaaaatgtttcaagcaAGCTGATAGTTTAAGAAATCATGTAAAAGTGTACTCAAGTGAGAAGCTTTGTGAATGCAAACAGGTTTTGAAGTGTTTTTGCCAAGAGGGATGTTTAATGACACTTGAAAAAACCTGCACATATGAGATACCTTTCAGTTGCACACAAAGTGAGAAGAATTGTAGCCTCGATAtaaccaaaactgaaaacttcaGCATTCAACCAGTTGCGATGGGTTCTAATTGTGATATTAAGAGTACTACATCTATAGCAACATCCAACCTTCAAGAACGTGAGCAATGTCATGTGGAATGTTGGATTTGTCAAGAGGAATTATGTAGTCAAGCCCAACTTTTGGAACACTATGACAATCATATGAAATAGAACATTTTAGCTCAATGTTATTTTCAGTAATCACTTAAAACCATTTAAATCAAACACATCCAGTTCACTAAAATCTGATAACGGTGATAAAATTGAAAGAGGCTTTTAATTAGGAAATGACCAGCTGAAGTGGAAGTGATAGTTGTGAGATTGTAACCTGCATTGTTCAATTTTCCATGCGTTTCAAATAGGCAACTCTTAAAAATAATAGTGAACCAGTTGTGTTGAGTTGTGGTCAAGTTTTCTgatgttttgtttcattaaaagaGGATATTTTGTTGATGCCTCTCATTTGATGTGTAATTACAGTCTAGAGCAAAACTGTCCACAGGTATCCCAGGGTCCCTGGGAGCCATACAGCTCTTAGATTTGTATTTAACGAAAAACCACATCGCCAGAAATCTGGCCTTCCTTACATGTAATCACTGAGTTACAAAAACACTATTCAGTAACATTGCATTGAATTTGGAATCGCAGGAGCATTCCATTGCATTGAAGAATAAATCTACGAGCGCTCTATCAtcaatgctgttctctgattggctaggctactcactatctattctgtgttagatagtgagtagcgtatgGTGAGCGCTTGTTAGGAAACTGGtggcttctttgcgtttttgaagtgtctgtgaggaggttctatttatgtatttatttatttttatttcatcaattgctacttacactgcttacaatacaatattaataTAGTTACTCACACTGCTTATTACTTACGCCACTTACGATACTAacacttacaatacaatacgcATACTTgcgctactaacaatactaatacttacactatTTACGATACAACATAGCTAGATTACTTGCACTACTTACAACTCTAGCACAGCAAAATCGTACCAGTTTACTCCTGTCAGTAATTTAAATTTCGGAATTGcgaattaaataaaatatacaaggTATATATGCACCTTGTttcttttcccttcatttttattttcgttttcaggGACTAGGGTCAAACTGTCAAGAGATTACAAAAGAGATAACAGAGGCTCCCACTTTGATTGCGATTGTAgttgtattttttccatttcatagaTATGTTTCAAATACAGTAAGAAATCGTTAAGTTTTGGAGAACATTTTCTCTGTATACATAGccaaatataatatttagcaTTTAAGCAGCAAAAGTTAATTTGGAGTTTATGTTTAGAGCTATCCAGCCATAGACCCAGTGCTGTATCAGGCCCTAAGGGTGTGTCTTTGGCAATGACTTGGCAAGACTGTAGCCATACTTTAAAATTGGTCCAAAAATATTGAGTTTTTGGGCGAGCCCAAAATAAATGTGCcagtttctctgtttctctttcgCAGAAAGTGCATTTCTTGCTATCAACGAgaccattttttttcaagaagttgtttgttgatattcttctatgaagaaatttaaaattgaaagttatAAGTTTTGTGCTCTTCGTACATTGAAAAGCCATTTGATAAACCTCTTTCCAGTTGAgctcttgttttgttgtgagaGTGATGTCTTCCTGCCACTTTTGTCGACTTTGGTTGGGTGATTCACTTTTTTCTGATACAAGTTTCTTATACACTAGTCTACTAggttttttgctgtttaaaaaCTTTTCACAAGAAACTTTCAAGTTTAATCGAGGTTCTGGTATTATGGGTTATATTTCTTTGCAGAAGTTTTATTGAAGAAATGATTCCAAGAAAGGTTAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR050169	Family	Krueppel C2H2-type zinc-finger	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23232	KRAB DOMAIN C2H2 ZINC FINGER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala