Gene detail

Detailed information of XP_020628188.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_551:17772...41399
NR annotation: XP_020628188.1, uncharacterized protein LOC110065394 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC110065394

ATGTGCCATCTTCTAGTTTTTGCAAGAGTTTTCACACTCTCATTTGTTGTCTTTGGACGAATTTCAGGCTCAAATGGAATGCTATTTGGATCTGGAGACATACATGTCCTACAAGGTAAAGACTATGACTGCAAAATATTTCCCTTTGACCCAGAGTTCTCCTCTGACGACGTTCGCGTGCAGTTGGCTGTTACATCTAAGAAATACGAGGCAGCTGTAACCTGGATAGGGAGTGCCTCGAGATCAGGTTTTCAAGGATGTGTTGCCACCTCCGGAGCGATCGCTGGATCCAGGACTGTGTCTTTGCAGTGGATTGCCTATCGAACTGTTTCAAACGGCGCATATGAGAGGAAAGTCAATATTCCGATGTGGACCACAGGAACTGAGTGCGTTCGGGAAGATTTTCCAAAGTGCCGTCGTGGTTTACGTAAGCTCCCTTTTGGTATTTGGTCTCACCCGTTAAGGTTTTTATTCCTTCTCCAGCCTTTTGCCACAGCTCCGTACGTGTTCGTAACCCCTGTCCATCCTGTTGCAAACAAACATGACGCCGCAAGCGTCTGGGCGGAAGATGTTACTAGATATAATTTCAGAGCATGTCTTCGCGAGTTGAAAAACTTTGATGGTGCACACAAATACCTGTCTGTGGTAAGTATTTGGGGCTTTTGTAGACAAATATTTAGAGATCTTGTTGATGAAATAACAGTCCTTTCATATTCAAGACTTGACGGAGAATTGCTACTTCAGAATTCAAAACTAAAGATTGAAAATTATTTAAAAATTGAAAATTTTCAGACTATTGACTTCCCTCAGAGATTCTTTGAAACTCCAACTCTGGTTACGACAACCAAGCATCACAAAGATGACGTCAACGCCCGCATTGATGCTGATGATAACGCAATTACAGAATGGATTGAAAGCATTACAACGACAGACTTCCAGGTGTGCTTGAAGGATATTCAACGCTATGACGCTCATCACGACCCCATCACGCTTAATTATATGGCTGCTGGGTATTACCATCCCTGCAACGGTAGAACATGCCCATTTTATGGGGAATGCCAAGCGCCTACTGAAACAACACACAAATGCGTGTGTATTCCTTGCACAGGAGATCAGTCGGCTCCACTGTGTGACAGCAATGACGTCACTCACAAGAACAAATGTGAATACAACTACCACGTGTGTCAGGCACAAGAAGAACCCGGTATAAAGCACTATGGCGGATGCAAACGTAAGTCCTTGCTTGTTTTATGTGGCTTAATATCTTACCGTAAAATATCAAGAAATCAAGAAAGTCAAAGAAGGCTTGAAAAGCATTCCTGGAACATTTCTTCTTCTTTCCAGTTTAACTGCTGTCACTCTGTTCGTAAACTAGGGAAAACATTTGTCCTTCAACGAGGTCGTGTTGCCCTCCGCTTAGAGACAGAGGATGTGCGCTGCAGAAAGGTTTACTTTAAGACGGGAATTTTCCAGAGCAGCAAAGGAAATATTCGCATTCAGACCACCATCAACTACTTCAACTATAGCGGAAACTTCATTCACGACGCTGCAGTGACCTGGGTCGAGAACGTTAATCTCACCTCCTTTGATGTGTGTGCGCTTAAAGCAGGAAGACTAGACCGCTTGACTCCTGATGGCGGGCTCACATTTATTGATTTCATCGCTTTCCAGGAGGCTCCAAAGAGTGCTTCGGCTGGTCAAGTCATTATGACAAATTGGTGGGATGGAACACAATGCGAATCAGTTACATTTGAAGTGAGTCTGAACCGAGACAAGGTTTTTTTTTTTNTCATTATGACAAATTGGTGGGATGGAACACAATGCGAATCAGTTACATTTGAAGCAACCGAGATTTCCTCACCACACATTTTGGTGACTGCTCAGCACACAGTAGTGGGTCTGAAACACGACGCCGCCACGGTCTGGGTCGAGAGTGTCAACACCAATACCTTTCTCGCCTGTTCGAGAGAAATGCAGAACTTTGATGGATTACACAAAGACATCAGATTGAACTGGTTTGTATACGACACACTTCCAACAAATCTTGCCGGTGAAAAACATATCATCGATTTCCAAAACAACTTTTTACCTCTTGCTGAGAATCACAACTCTTACTGTGAGACCGTGAATTTTACAACGCCCAAGAATTCGACGCCCACGGTCATTGTGTCAGCGTCTCATCTTAATTCAGCCAGTCCCGAACATAACAGCATTGCCACTTGGGTAGAGCAAATTACAACTAGAGGCTTCCAAGTGTGTGTCAAAGAACTTCATAATCTGAATGGTTACGACTCCGTGAAGGTGGCTGCACTTATCATTGGTAAGCTTTTGTATTTTACATTATAA

Transcript

rna-XM_020772529.1

ATGTGCCATCTTCTAGTTTTTGCAAGAGTTTTCACACTCTCATTTGTTGTCTTTGGACGAATTTCAGgcTCAAATGGAATGCTATTTGGATCTGGAGACATACATGTCCTACAAGGTAAAGACTATGACTGCAAAATATTTCCCTTTGACCCAGAGTTCTCCTCTGACGACGTTCGCGTGCAGTTGGCTGTTACATCTAAGAAATACGAGGCAGCTGTAACCTGGATAGGGAGTGCCTCGAGATCAGGTTTTCAAGGATGTGTTGCCACCTCCGGAGCGATCGCTGGATCCAGGACTGTGTCTTTGCAGTGGATTGCCTATCGAACTGTTTCAAACGGCGCATATGAGAGGAAAGTCAATATTCCGATGTGGACCACAGGAACTGAGTGCGTTCGGGAAGATTTTCCAAAGtgccgtcgtggtttacgTAAGCTCCCTTTTGGTATTTGGTCTCACCCGTTAAGGTTTTTATTCCTTCTCCAGCCTTTTGCCACAGCTCCGTACGTGTTCGTAACCCCTGTCCATCCTGTTGCAAACAAACATGACGCCGCAAGCGTCTGGGCGGAAGATGTTACTAGATATAATTTCAGAGCATGTCTTCGCGAGTTGAAAAACTTTGATGGTGCACACAAATACCTGTCTGTGGTAAGTATTTGGGGCTTTTGTAGACAAATATTTAGAGATCTTGTTGATGAAATAACAGTCCTTTCATATTCAAGACTTGACGGAGAATTGCTACTTCAGAATTCAAAACTAAAgattgaaaattatttaaaaattgaaaattttcagACTATTGACTTCCCTCAGAGATTCTTTGAAACTCCAACTCTGGTTACGACAACCAAGCATCACAAAGATGACGTCAACGCCCGCATTGATGCTGATGATAACGCAATTACAGAATGGATTGAAAGCATTACAACGACAGACTTCCAGGTGTGCTTGAAGGATATTCAACGCTATGACGCTCATCACGACCCCATCACGCTTAATTATATGGCTGCTGGGTATTACCATCCCTGCAACGGTAGAACATGCCCATTTTATGGGGAATGCCAAGCGCCTACTGAAACAACACACAAATGCGTGTGTATTCCTTGCACAGGAGATCAGTCGGCTCCACTGTGTGACAGCAATGACGTCACTCACAAGAACAAATGTGAATACAACTACCACGTGTGTCAGGCACAAGAAGAACCCGGTATAAAGCACTATGGCGGATGCAAACGTAAGTCCTTGCTTGTTTTATGTGGCTTAATATCTTACCGtaaaatatcaagaaatcaaGAAAGTCAAAGAAGGCTTGAAAAGCATTCCTGGaacatttcttcttctttccagtttaaCTGCTGTCACTCTGTTCGTAAACtagggaaaaCATTTGTCCTTCAACGAGGTCGTGTTGCCCTCCGCTTAGAGACAGAGGATGTGCGCTGCAGAAAGGTTTACTTTAAGACGGGAATTTTCCAGAGCAGCAAAGGAAATATTCGCATTCAGACCACCATCAACTACTTCAACTATAGCGGAAACTTCATTCACGACGCTGCAGTGACCTGGGTCGAGAACGTTAATCTCACCTCCTTTGATGTGTGTGCGCTTAAAGCAGGAAGACTAGACCGCTTGACTCCTGATGGCGGGCTCACATTTATTGATTTCATCGCTTTCCAGGAGGCTCCAAAGAGTGCTTCGGCTGGTCAAGTCATTATGACAAATTGGTGGGATGGAACACAATGCGAATCAGTTACATTTGAAGTGAGTCTGAACCGAGACAAggtttttttttttNTCATTATGACAAATTGGTGGGATGGAACACAATGCGAATCAGTTACATTTGAAGCAACCGAGATTTCCTCACCACACATTTTGGTGACTGCTCAGCACACAGTAGTGGGTCTGAAACACGACGCCGCCACGGTCTGGGTCGAGAGTGTCAACACCAATACCTTTCTCGCCTGTTCGAGAGAAATGCAGAACTTTGATGGATTACACAAAGACATCAGATTGAACTGGTTTGTATACGACACACTTCCAACAAATCTTGCCGGTGAAAAACATATCATCGATttccaaaacaactttttaccTCTTGCTGAGAATCACAACTCTTACTGTGAGACCGTGAATTTTACAACGCCCAAGAATTCGACGCCCACGGTCATTGTGTCAGCGTCTCATCTTAATTCAGCCAGTCCCGAACATAACAGCATTGCCACTTGGGTAGAGCAAATTACAACTAGAGGCTTCCAAGTGTGTGTCAAAGAACTTCATAATCTGAATGGTTACGACTCCGTGAAGGTGGCTGCACTTATCATTGGTAAGCTTTTGTATTTTacattataataaagtttccatataacgcgcgttctgattgtctgaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09458	H_lectin	H-type lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR019019	Domain	H-type lectin domain	Interproscan
IPR037221	Homologous_superfamily	H-type lectin domain superfamily	Interproscan
IPR002350	Domain	Kazal domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan