Gene detail

Detailed information of XP_020629155.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_651:473874...478225
NR annotation: XP_020629155.1, leucine-rich repeat-containing protein 69-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020773496.1

GTACTTGAGAAATTTAGGGAGTTGTCTCTCGAAAGCGAAAGTGCTTCAATACAGCGGCATTGAAAGTAATCGGTTCTTTTCTGTTATTGCAGTCCAAGATACTTGTGAACCATTCAAACGTTAACAGTTGTAAGTATCACTGTAAAAATTGAAGATGGGGAACATTTCTGCCGAGAAGCTCAGGGAGCTGatttttacaaatgtttacAGAGAAAGGGCCTTGCATCTGAGTGGTAACGGGTTGTCAAAAGTTCCTGAAGCTGTTTTTGAGCTGACTGAATTGGAGGAACTTAACTTGTCAGGTAATTGTCTGAAAGAATTACCAACAAGTATTAACAGGCTGAAAAATCTGAAAGGGCTGAGATTAGACCGGAACCAGTTGAGAGAACTACCTCACAGTATTTGTGAGTTGAGCAACCTGACCAGGCTTACTGTGAGTAACAACCAGTTGTCTGTTCTACCTCCAAACATTAAACATCTCAAGAATCTCTGGGTATTGGACTTGAGTGATAACCAGTTGACTACATTGCCTGATGAGATTGGTGAACTGAAGGAGCTGGCATGGCTGTATGTGAGTAGCAACAAGCTGACAGTTTTATCATCACACATAAAGCATCTCAATAAACTCTGGGAACTGGATTTGAGTGGTAACCAGTTGACTACATTGCCTGATGAGATTGGTGAACTGAAGAAGCTGAGATGGCTGTATGTGACTGATAATCCTCTAACATTGGAAGGAATGAGAAAGGTTGTGAAGCTTCAGAACAATAAGATGATGTTTTCCAAAGATGTTACGGAACATGTATTTGGACGAGAAGCAGAAGGACAAAGAGCACAACTGGCTTATGAAAAGGCTCTAAGAGACGGCTTTGTAAATGTTTACCGTGGTCGCATGTTACTAATTGGTCAGGACCGTGCTGGTAAAACCAGTCTAAAGAAGAGTCTCTTAGGCCTGCCATTTGACCCTAAAGAACAGAGTACTGAGGGAATTGAAGTACAAGCTTCAACATGTAAAATTGAAGTTGAGCAAGTTAAGAACTGGCATTCCACCCATGAGAACAAACCAGGATTGGTAATTAGTCCTAAAGAGATATCAAGGGTGGTGGCGGAGAAACTTTGTGACATAACAATGGAATTAGAAAAGGGACATTCTACAACAGCAACAGAAGTAGCTGTAATGACAGAAGAAGAACATTTTAAAGAAGAAGAGGGAGGATTGTCTGAAGAAATTTCTTTTGGgaattttgacagaaaagtgATGGACTTGGAATTTGGAGCTGACAGAAATGATCCCAACAAGCATAAGGTTTGAATAAAGTTAATTGTTTAGAGGTACAATGTATATTTAATGCAGACATCTCAAATGTAGCAGAAATAGGTTAACTGTCACCAGAGAATTTGAGAACAAAAGCACTTCCTGTTTTGTTAGTCTTAAGTTTGCAACATGTAACAAACAACCTGAGTTGATGTGCAGTACCGCCTGAAAGTATGGACCCATCAGGTTGCGGCAAAACCTCGTCTTTGCCGCATGCTCCCACCTCACGTCCACCACAGGTGAAAATATGTAGCACCGCGGTAAAGACGAGTGCTACCGCAATGGAATAAATAGTGCGGCAAAACAGATGAGGTAATACCTCAGGAAAGTAACATATGTGTATCGAGTAGAGTGGCATTTTTCATCAACGTTGCATGTAAACTCCATCATAATTTGGAATCAAGAAACACACTTGGTGCAAAGTcgaacattttacatgtaaatgcctATCCTCTACTTTTGAAATCTACATGTGCTGACTTTTGGTAGGCCCTCTTATGAACTCTGACTACACTATTCGTAGCCATTTAATTAAGGGTTCCCAGGGTTTTGAAGGTCACTTGATTAGAATGGCAACAGGATGGAGCGGTCTACTACTGCCATAATCAACAACGTGTTGATACAGCGCCATTAAAGTACATCTGTTGATCCATAATTACGGCAACACGCGCTAAACGTTACCAGTTTCAGGTAAAAATGTAACTGTTTGTCATCTagttcattttttctttaattttaaaatcgaTGCATTGAAACTAGTAATGCAACTTCATGATTTTGTATTGGAAACAACAGAGTGTGTAGCATCTTTTGATTTCCACGAAAGGTCActtgaaatgtaaaaaaatcttCTTGCCTAAACTGGTGAAAGGTTTCGATTCTCCTTTTGATCAAGTGTATAAAGGCGAATGATATAAATACCCATAGGAATCTTGGCTTACAGGAAGATTACATGTATTGAAGGCCATCATGAGGAATAAAGAGCAGTCGCCACTCTaagaacaagaagatctttaagatcttacaaccacgcttttaaaacttaactgttttggtagcaCTATACAGTCTCACTgcaatgcacattccaaagcagtccttgaagattcattgattactgcagACACCACATCAGTTGATCAACACAacctgtattattgcaccatcagtcgtaggcGTTGTGAAATTGCCGATGATGTAATTACTTCCAGCACATGTCATAATATGGGATCAGGAGTGAcccgaaggaaaaaaaaacggaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050216	Family	Leucine-rich repeat domain-containing protein	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48051	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan